RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 AGPAT3Q9NRZ7 376 aa13.06□□□□□ -0.32
VPS16-208ENST00000487461 GCNT4Q9P109 453 aa13.06□□□□□ -0.32
VPS16-208ENST00000487461 CDH9Q9ULB4 789 aa13.06□□□□□ -0.32
VPS16-208ENST00000487461 NME7Q9Y5B8 376 aa13.06□□□□□ -0.32
VPS16-208ENST00000487461 DNAH14Q0VDD8 3507 aa13.06□□□□□ -0.32
VPS16-208ENST00000487461 TRAV19A0A0A6YYK7 116 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 PRR5-ARHGAP8B1AHC4 643 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 EGFP01133 1207 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 USP17L7P0C7H9 530 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 BDNFP23560 247 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 CNR2P34972 360 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 CYP2J2P51589 502 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 ARHGAP8P85298 464 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 LMNB2Q03252 620 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 PSMD6Q15008 389 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 ZNF77Q15935 545 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 SNRNP35Q16560 246 aaKnown RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 NAIF1Q69YI7 327 aaPredicted RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 C4orf50Q6ZRC1 276 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 UNC13DQ70J99 1090 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 NELFCDQ8IXH7 590 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 MYLPFQ96A32 169 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 SPATA17Q96L03 361 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 MMS19Q96T76 1030 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 POLR3BQ9NW08 1133 aaPredicted RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 DUS2Q9NX74 493 aaKnown RBP13.05□□□□□ -0.32
VPS16-208ENST00000487461 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
VPS16-208ENST00000487461 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
VPS16-208ENST00000487461 HDCP19113 662 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 TNNI1P19237 187 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 SDHBP21912 280 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 GJA4P35212 333 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
VPS16-208ENST00000487461 GRIK1P39086 918 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 USP46P62068 366 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
VPS16-208ENST00000487461 CYP27A1Q02318 531 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 CYP24A1Q07973 514 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 MTF1Q14872 753 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 WDR5BQ86VZ2 330 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 FSIP1Q8NA03 581 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 XXYLT1Q8NBI6 393 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 OSCP1Q8WVF1 389 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 PCED1BQ96HM7 432 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 CGRRF1Q99675 332 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 ECT2Q9H8V3 914 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 SLC39A2Q9NP94 309 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 WNT6Q9Y6F9 365 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
VPS16-208ENST00000487461 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
VPS16-208ENST00000487461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
VPS16-208ENST00000487461 TACC1O75410 805 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 CKMP06732 381 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 FAM163BP0C2L3 166 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 AFMP43652 599 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 PXNP49023 591 aaPredicted RBP13.03□□□□□ -0.32
VPS16-208ENST00000487461 ZXDBP98169 803 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 AMPD2Q01433 879 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 USP4Q13107 963 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 CUL4BQ13620 913 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
VPS16-208ENST00000487461 MDH1BQ5I0G3 518 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 CEP68Q76N32 757 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 FAM160A2Q8N612 972 aaPredicted RBP13.03□□□□□ -0.32
VPS16-208ENST00000487461 OR6B3Q8NGW1 331 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
VPS16-208ENST00000487461 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 P2RY13Q9BPV8 354 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.03□□□□□ -0.32
VPS16-208ENST00000487461 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
VPS16-208ENST00000487461 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.32
VPS16-208ENST00000487461 ZNF638Q14966 1978 aaKnown RBP13.02□□□□□ -0.32
VPS16-208ENST00000487461 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 ZNF840PA6NDX5 716 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 LRP3O75074 770 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 ATG13O75143 517 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 RNF40O75150 1001 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 F13A1P00488 732 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 PTPN1P18031 435 aaKnown RBP13.02□□□□□ -0.33
VPS16-208ENST00000487461 DRD1P21728 446 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 ME1P48163 572 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 IFNAR2P48551 515 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 MYL6P60660 151 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms