RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PTCHD3Q3KNS1 767 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 PREPLQ4J6C6 727 aaPredicted RBP5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 ARHGAP15Q53QZ3 475 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 PRR16Q569H4 304 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 HSP90AB4PQ58FF6 505 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 ADGRG5Q8IZF4 528 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 CACNA2D3Q8IZS8 1091 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 FAM9AQ8IZU1 332 aaPredicted RBP5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 CPXCR1Q8N123 301 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 SMCR8Q8TEV9 937 aaPredicted RBP5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 NACC2Q96BF6 587 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 RMDN3Q96TC7 470 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 PTDSS2Q9BVG9 487 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 LRFN1Q9P244 771 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 GRHPRQ9UBQ7 328 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 KCNE5Q9UJ90 142 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 NDRG4Q9ULP0 352 aaKnown RBP5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 ZMYND8Q9ULU4 1186 aaPredicted RBP5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 IFT140Q96RY7 1462 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 SPATA31A3Q5VYP0 1347 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 A0A1W2PS29 197 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 F5H697 171 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 PIP5K1BO14986 540 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 PIAS2O75928 621 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 IDEP14735 1019 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 KCNA3P22001 575 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 ACRV1P26436 265 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 NDUFV1P49821 464 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 SELENOPP49908 381 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 RENBPP51606 427 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 RPS7P62081 194 aaKnown RBP5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 PRKD1Q15139 912 aaPredicted RBP5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 CYP2A13Q16696 494 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 GEN1Q17RS7 908 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 ARHGAP40Q5TG30 622 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 RAP1GAP2Q684P5 730 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 LDHAL6AQ6ZMR3 332 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 CHST13Q8NET6 341 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 ZNF384Q8TF68 577 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 STYXQ8WUJ0 223 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 SNX19Q92543 992 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 TMEM125Q96AQ2 219 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 RNF31Q96EP0 1072 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 PCDHAC1Q9H158 963 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 MYLK2Q9H1R3 596 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 CXorf36Q9H7Y0 433 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 AKIP1Q9NQ31 210 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 NECTIN3Q9NQS3 549 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 NOX1Q9Y5S8 564 aa5.86□□□□□ -1.47
PRPF38A-203ENST00000487160 AQP7P3A6NL99 342 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 RNASET2O00584 256 aaKnown RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 RGS10O43665 173 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 TLR5O60602 858 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 SRGAP2O75044 1071 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 FGAP02671 866 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 EGR1P18146 543 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 NPTX2P47972 431 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 PRKAG1P54619 331 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 RESTQ13127 1097 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 E2F2Q14209 437 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 PTK2BQ14289 1009 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 HLXQ14774 488 aaPredicted RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 SPDYE7PQ495Y7 208 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 RBM20Q5T481 1227 aaKnown RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 TMTC4Q5T4D3 741 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 VPS53Q5VIR6 699 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 RGS7BPQ6MZT1 257 aaPredicted RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 USP17L6PQ6QN14 398 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 MICALCLQ6ZW33 695 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 ZNF354CQ86Y25 554 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 SMAP1Q8IYB5 467 aaPredicted RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 DNAJB14Q8TBM8 379 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 FAM71BQ8TC56 605 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 LTV1Q96GA3 475 aaPredicted RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 BOD1Q96IK1 185 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 C20orf173Q96LM9 149 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 ALOXE3Q9BYJ1 711 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 FAM83DQ9H4H8 585 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 GBA2Q9HCG7 927 aaPredicted RBP5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 DACT1Q9NYF0 836 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 HPSEQ9Y251 543 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 DGKBQ9Y6T7 804 aa5.85□□□□□ -1.47
PRPF38A-203ENST00000487160 GAGE12BA1L429 117 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 GAGE12HA6NDE8 117 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 MYADML2A6NDP7 307 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 MARCH11A6NNE9 402 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 K7ESM1 405 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 ACKR2O00590 384 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 TRIM38O00635 465 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 PLSCR1O15162 318 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 NPHP1O15259 732 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 TRIAP1O43715 76 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 NDUFA10O95299 355 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 TNFRSF6BO95407 300 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 HLA-DOAP06340 250 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 PAX3P23760 479 aa5.84□□□□□ -1.47
PRPF38A-203ENST00000487160 GATA3P23771 443 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms