RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SSR1P43307 286 aaKnown RBP7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ACADSBP45954 432 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PEX5P50542 639 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 RNASE9P60153 205 aaKnown RBP7.43□□□□□ -1.22
SF3A3-206ENST00000487062 MBTPS1Q14703 1052 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ACAP1Q15027 740 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 BRD3Q15059 726 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PKN2Q16513 984 aaKnown RBP7.43□□□□□ -1.22
SF3A3-206ENST00000487062 UPP1Q16831 310 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 MAP9Q49MG5 647 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PLEKHG4Q58EX7 1191 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ODF2Q5BJF6 829 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 NOMO2Q5JPE7 1267 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 CYP4A22Q5TCH4 519 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 WSCD1Q658N2 575 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 OR6B2Q6IFH4 312 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 LLGL2Q6P1M3 1020 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 DCLRE1AQ6PJP8 1040 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ANKRD33Q7Z3H0 272 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 RTN4RL1Q86UN2 441 aaPredicted RBP7.43□□□□□ -1.22
SF3A3-206ENST00000487062 OSTM1Q86WC4 334 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 XYLT1Q86Y38 959 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ZDHHC17Q8IUH5 632 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ABI1Q8IZP0 508 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PDCL2Q8N4E4 241 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 NIPA2Q8N8Q9 360 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 C12orf29Q8N999 325 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ANKLE1Q8NAG6 615 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ANKRD52Q8NB46 1076 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 B3GALNT2Q8NCR0 500 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 DBF4BQ8NFT6 615 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 CCDC26Q8TAB7 109 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 UBA3Q8TBC4 463 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 FNIP1Q8TF40 1166 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 RSPH1Q8WYR4 309 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 MCRS1Q96EZ8 462 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 CPXM1Q96SM3 734 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 NCAPGQ9BPX3 1015 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 SYT15Q9BQS2 421 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 MED10Q9BTT4 135 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PARD6BQ9BYG5 372 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ANKZF1Q9H8Y5 726 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ASNSD1Q9NWL6 643 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 EHD2Q9NZN4 543 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 CYTH4Q9UIA0 394 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 TMEM59LQ9UK28 342 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 CDH9Q9ULB4 789 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 MTUS1Q9ULD2 1270 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 LRFN2Q9ULH4 789 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PCDHB7Q9Y5E2 793 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 SCN5AQ14524 2016 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 CCDC151A5D8V7 595 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 E5RJQ4 531 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 ENPP3O14638 875 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 TRAPPC3O43617 180 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 NBNO60934 754 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 AP1G2O75843 785 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RNF8O76064 485 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 B3GAT3O94766 335 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 ERBB2P04626 1255 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 CYP11A1P05108 521 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 PFKMP08237 780 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 CCDC130P13994 396 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 H2AFXP16104 143 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 PSMA2P25787 234 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 LMO2P25791 158 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 SCNN1AP37088 669 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 AARSP49588 968 aaKnown RBP eCLIP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 C1QTNF8P60827 252 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RPL7AP62424 266 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RNASELQ05823 741 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 ZNF211Q13398 564 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 HADHQ16836 314 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 TIGD5Q53EQ6 642 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 ZFYVE27Q5T4F4 411 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 FAM102AQ5T9C2 384 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 LRRC38Q5VT99 294 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 DCAF12L1Q5VU92 463 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 CC2D1AQ6P1N0 951 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 WDR93Q6P2C0 686 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 TMCO3Q6UWJ1 677 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 TTC30AQ86WT1 665 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 KATNAL2Q8IYT4 538 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 THEM5Q8N1Q8 247 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 SLC35F5Q8WV83 523 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 LINC01599Q8WXQ3 324 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 ALG3Q92685 438 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 KRT35Q92764 455 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RBM41Q96IZ5 413 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 ZNF333Q96JL9 665 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 HSFY1Q96LI6 401 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RUNDC3BQ96NL0 473 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 KRT12Q99456 494 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 HNRNPABQ99729 332 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 SLC4A5Q9BY07 1137 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 TRIM7Q9C029 511 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 HIPK3Q9H422 1215 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms