RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SGK1O00141 431 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 STRNO43815 780 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 ADRB2P07550 413 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 TCF4P15884 667 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 HOXA13P31271 388 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 CIITAP33076 1130 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 SIK1P57059 783 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 FAAP100Q0VG06 881 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 BST1Q10588 318 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 PTK7Q13308 1070 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 DCTN2Q13561 401 aaKnown RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 ALCAMQ13740 583 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 CIAPIN1Q6FI81 312 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 CDHR3Q6ZTQ4 885 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 KCTD17Q8N5Z5 321 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 ICA1LQ8NDH6 482 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 HIPK4Q8NE63 616 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 RILPQ96NA2 401 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 GRIP2Q9C0E4 1043 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 WWP1Q9H0M0 922 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 BTBD7Q9P203 1132 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 SH3GLB1Q9Y371 365 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-208ENST00000486641 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
CCDC171-208ENST00000486641 CAPN8A6NHC0 703 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 NDC80O14777 642 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 PDE5AO76074 875 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 ATP6V1B1P15313 513 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 VARSP26640 1264 aaKnown RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 EPHB1P54762 984 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 RPL26P61254 145 aaKnown RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SNAPC2Q13487 334 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 USH1GQ495M9 461 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 MFSD7Q6UXD7 560 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 TAB3Q8N5C8 712 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 CCDC127Q96BQ5 260 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 HSPBAP1Q96EW2 488 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 C7orf26Q96N11 449 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SLITRK1Q96PX8 696 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 BTBD9Q96Q07 612 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SENP6Q9GZR1 1112 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 C10orf88Q9H8K7 445 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 GINM1Q9NU53 330 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 PPME1Q9Y570 386 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 IQANK1A0A1B0GTG1 560 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 I3L4J1 428 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 PMM2O15305 246 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 DENRO43583 198 aaKnown RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 CCNT2O60583 730 aaKnown RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SERPINA6P08185 405 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 RAG1P15918 1043 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 FUT4P22083 530 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 PMLP29590 882 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 TM4SF1P30408 202 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SLC5A2P31639 672 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SERPINB6P35237 376 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 FDFT1P37268 417 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SERPINB8P50452 374 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 NCKAP1LP55160 1127 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 KCNQ4P56696 695 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 TMPRSS15P98073 1019 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 ZNF200P98182 395 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 PLCB3Q01970 1234 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 GRAMD1BQ3KR37 738 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 KLHL35Q6PF15 583 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 RNF168Q8IYW5 571 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 RCOR2Q8IZ40 523 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 MARVELD2Q8N4S9 558 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 CPT1BQ92523 772 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 NACC1Q96RE7 527 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 EBF4Q9BQW3 602 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 YIPF2Q9BWQ6 316 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 C20orf27Q9GZN8 174 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 NYXQ9GZU5 481 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 ARHGEF38Q9NXL2 777 aa11.12□□□□□ -0.63
CCDC171-208ENST00000486641 TDRKHQ9Y2W6 561 aaKnown RBP11.12□□□□□ -0.63
CCDC171-208ENST00000486641 SBF2Q86WG5 1849 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TCRBV7S3A2A0A539 114 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 GPC3P51654 580 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
CCDC171-208ENST00000486641 MAMLD1Q13495 774 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TBCCQ15814 346 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
CCDC171-208ENST00000486641 BBS9Q3SYG4 887 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 KRT39Q6A163 491 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 LRRC8BQ6P9F7 803 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 PAOXQ6QHF9 649 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TSHZ1Q6ZSZ6 1077 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TRIM67Q6ZTA4 783 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms