RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SP3Q02447 781 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 KRT71Q3SY84 523 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 DNAJC21Q5F1R6 531 aaKnown RBP21.42■■□□□ 1.02
HPS3-206ENST00000486530 XKR4Q5GH76 650 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 UBXN11Q5T124 520 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 EMC1Q8N766 993 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 CCHCR1Q8TD31 782 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 TRAIPQ9BWF2 469 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 CENPHQ9H3R5 247 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 SMIM28A0A1B0GU29 152 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 TP73O15350 636 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 PFKMP08237 780 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ADCY8P40145 1251 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 PNPLA4P41247 253 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ADCY2Q08462 1091 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ARFGAP1Q8N6T3 406 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 C12orf29Q8N999 325 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 UPF3AQ9H1J1 476 aaKnown RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 C3orf70A6NLC5 250 aaPredicted RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 PIRO00625 290 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 RNF8O76064 485 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 C6orf222P0C671 652 aaPredicted RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 NKX3-2P78367 333 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 CACNB2Q08289 660 aaPredicted RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 BYSLQ13895 437 aaKnown RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 ZSCAN26Q16670 478 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 PKDCCQ504Y2 493 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 FBXO47Q5MNV8 452 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 PPP1R26Q5T8A7 1209 aaPredicted RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 TRMT10CQ7L0Y3 403 aaKnown RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 CROCCP2Q86T23 111 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ARFGAP2Q8N6H7 521 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ACSF2Q96CM8 615 aaPredicted RBP21.41■■□□□ 1.02
HPS3-206ENST00000486530 FAM118BQ9BPY3 351 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ZWILCHQ9H900 591 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 ASNSD1Q9NWL6 643 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
HPS3-206ENST00000486530 E5RJQ4 531 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 IL1R2P27930 398 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 ZNF143P52747 638 aaPredicted RBP21.4■■□□□ 1.02
HPS3-206ENST00000486530 ITGA8P53708 1063 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 TRIP13Q15645 432 aaPredicted RBP21.4■■□□□ 1.02
HPS3-206ENST00000486530 GNASQ5JWF2 1037 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 GSTA5Q7RTV2 222 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 ACOT1Q86TX2 421 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 MTG1Q9BT17 334 aaPredicted RBP21.4■■□□□ 1.02
HPS3-206ENST00000486530 CFHR5Q9BXR6 569 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 SEMA4AQ9H3S1 761 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 HESX1Q9UBX0 185 aa21.4■■□□□ 1.02
HPS3-206ENST00000486530 SEPT4O43236 478 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 RIPK2O43353 540 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 GPD1P21695 349 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 KLRC2P26717 231 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 PCK1P35558 622 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 SNX16P57768 344 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 GNGT1P63211 74 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 SOWAHAQ2M3V2 549 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 ARHGAP17Q68EM7 881 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 OR6B2Q6IFH4 312 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 FAM183BPQ6ZVS7 135 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 OR6B3Q8NGW1 331 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 FRMD8P1Q9BZ68 369 aaPredicted RBP21.39■■□□□ 1.02
HPS3-206ENST00000486530 GDAP2Q9NXN4 497 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 ANAPC5Q9UJX4 755 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 DNPEPQ9ULA0 475 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 DRG1Q9Y295 367 aaKnown RBP21.39■■□□□ 1.02
HPS3-206ENST00000486530 IPPQ9Y573 584 aa21.39■■□□□ 1.02
HPS3-206ENST00000486530 PGK1P00558 417 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 IVLP07476 585 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 IRAK1P51617 712 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 HTRA3P83110 453 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 SLC29A2Q14542 456 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 TAZQ16635 292 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 SMTNL2Q2TAL5 461 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 CCDC25Q86WR0 208 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 NKD2Q969F2 451 aaPredicted RBP21.39■■□□□ 1.01
HPS3-206ENST00000486530 CNPY3Q9BT09 278 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 DNAI2Q9GZS0 605 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 KLK14Q9P0G3 267 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 NME7Q9Y5B8 376 aa21.39■■□□□ 1.01
HPS3-206ENST00000486530 C2CD4BA6NLJ0 364 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 M0QZ92 97 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 SHBGP04278 402 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 KDELR1P24390 212 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 MIPP30301 263 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 TAF6P49848 677 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 ATP1A2P50993 1020 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 VCPP55072 806 aaKnown RBP21.38■■□□□ 1.01
HPS3-206ENST00000486530 LRRC31Q6UY01 552 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 FAM228AQ86W67 206 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 TTC30AQ86WT1 665 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 ALLCQ8N6M5 410 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 TTC13Q8NBP0 860 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 TMEM109Q9BVC6 243 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 RNF39Q9H2S5 420 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 AAASQ9NRG9 546 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 FAM49BQ9NUQ9 324 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 ZNF148Q9UQR1 794 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 GRIN2DO15399 1336 aa21.38■■□□□ 1.01
HPS3-206ENST00000486530 A8MXQ7 604 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms