RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 DDX1Q92499 740 aaKnown RBP18.9■□□□□ 0.62
MCF2L-226ENST00000486210 TSPAN18Q96SJ8 248 aa18.9■□□□□ 0.62
MCF2L-226ENST00000486210 ANGPTL2Q9UKU9 493 aa18.9■□□□□ 0.62
MCF2L-226ENST00000486210 ANK1P16157 1881 aa18.9■□□□□ 0.62
MCF2L-226ENST00000486210 TSC2P49815 1807 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 TTC26A0AVF1 554 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 AXIN1O15169 862 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 FOXD2O60548 495 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 OAZ2O95190 189 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 RPL13P26373 211 aaKnown RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 LRPAP1P30533 357 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 FKBP3Q00688 224 aaKnown RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 SPAG1Q07617 926 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 DUSP4Q13115 394 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 PLD1Q13393 1074 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 SNRNP35Q16560 246 aaKnown RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 AASDHQ4L235 1098 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 FOXR2Q6PJQ5 311 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 BRSK2Q8IWQ3 736 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 CD302Q8IX05 232 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 FAM212AQ96EL1 285 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 ARRDC1-AS1Q9H2J1 176 aa18.89■□□□□ 0.61
MCF2L-226ENST00000486210 RBAKQ9NYW8 714 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 RALYQ9UKM9 306 aaKnown RBP18.89■□□□□ 0.61
MCF2L-226ENST00000486210 ZNF233A6NK53 670 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 OR6C75A6NL08 312 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 TULP1O00294 542 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-226ENST00000486210 CETN3O15182 167 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 TNK2Q07912 1038 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-226ENST00000486210 IL31Q6EBC2 164 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 CSGALNACT2Q8N6G5 542 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 TTC9BQ8N6N2 239 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 FAM84AQ96KN4 292 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
MCF2L-226ENST00000486210 KIAA1586Q9HCI6 787 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 PDE11AQ9HCR9 933 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 SLC27A5Q9Y2P5 690 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 ATG2BQ96BY7 2078 aa18.88■□□□□ 0.61
MCF2L-226ENST00000486210 EPN2O95208 641 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 PRAMEF12O95522 483 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 ZNF806P0C7X5 589 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 PAX3P23760 479 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 RAP1GAPP47736 663 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 AARSP49588 968 aaKnown RBP eCLIP18.87■□□□□ 0.61
MCF2L-226ENST00000486210 EPHB3P54753 998 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 SHC2P98077 582 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 CYP24A1Q07973 514 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 GPR17Q13304 367 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 ARHGAP29Q52LW3 1261 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 DENND4CQ5VZ89 1909 aa18.87■□□□□ 0.61
MCF2L-226ENST00000486210 MTMR11A4FU01 709 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 SOAT2O75908 522 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 NFICP08651 508 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 PSMC2P35998 433 aaKnown RBP18.86■□□□□ 0.61
MCF2L-226ENST00000486210 PXNP49023 591 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-226ENST00000486210 POU5F1Q01860 360 aaKnown RBP18.86■□□□□ 0.61
MCF2L-226ENST00000486210 JADE1Q6IE81 842 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 DNAJB7Q7Z6W7 309 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-226ENST00000486210 FILIP1Q7Z7B0 1213 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 EFCAB13Q8IY85 973 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 FAM186BQ8IYM0 893 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 SYNPOQ8N3V7 929 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 ATAD1Q8NBU5 361 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 ENOX1Q8TC92 643 aaKnown RBP18.86■□□□□ 0.61
MCF2L-226ENST00000486210 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 PSMG2Q969U7 264 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 CEP63Q96MT8 703 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 TMEM209Q96SK2 561 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 ATXN3LQ9H3M9 355 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 OBP2AQ9NY56 170 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 FRMD4BQ9Y2L6 1034 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 CHD6Q8TD26 2715 aa18.86■□□□□ 0.61
MCF2L-226ENST00000486210 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 DPYSL4O14531 572 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 ODC1P11926 461 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 TYMPP19971 482 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 GABRR2P28476 465 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 ALDH1A3P47895 512 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 ZNF445P59923 1031 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 DLG4P78352 724 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 NCAPHQ15003 741 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 PSMD6Q15008 389 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 ZBTB6Q15916 424 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 PLA2G2CQ5R387 149 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 GPR158Q5T848 1215 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 SPATA1Q5VX52 437 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 LMBRD2Q68DH5 695 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-226ENST00000486210 OVOS1Q6IE37 1185 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 KBTBD6Q86V97 674 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 IRF2BP1Q8IU81 584 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 C12orf50Q8NA57 414 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-226ENST00000486210 FAM200AQ8TCP9 573 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 CCDC127Q96BQ5 260 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 CHFRQ96EP1 664 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 LOXL4Q96JB6 756 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 SMOC1Q9H4F8 434 aa18.85■□□□□ 0.61
MCF2L-226ENST00000486210 OBSL1O75147 1896 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms