RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF197O14709 1029 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 ARHGAP6O43182 974 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 TBCAO75347 108 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 TDGF1P13385 188 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 PSMC3P17980 439 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 ATF6P18850 670 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 CYP3A5P20815 502 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 CASP5P51878 434 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 FKBP3Q00688 224 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 LRMPQ12912 555 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 SRSF5Q13243 272 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 TMEM132DQ14C87 1099 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 LPAL2Q16609 132 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 EDRF1Q3B7T1 1238 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 SLC39A12Q504Y0 691 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 SDHAF4Q5VUM1 108 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 WSCD1Q658N2 575 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 ANKRD40Q6AI12 368 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 TXNDC11Q6PKC3 985 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 ZNF852Q6ZMS4 543 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 DNAJB7Q7Z6W7 309 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 USP37Q86T82 979 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 IRF2BP1Q8IU81 584 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 ARID3BQ8IVW6 561 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 FAM3CQ92520 227 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 KCNN1Q92952 543 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 OSBPL6Q9BZF3 934 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 SLITRK6Q9H5Y7 841 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 IL21Q9HBE4 155 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 SLC39A2Q9NP94 309 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 ASAH2Q9NR71 780 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 OLFML3Q9NRN5 406 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 POLR3BQ9NW08 1133 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 MAPK8IP1Q9UQF2 711 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 PIAS3Q9Y6X2 628 aa10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 RIF1Q5UIP0 2472 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-208ENST00000486159 NCOR2Q9Y618 2525 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 GOLGA8IPA6NC78 632 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 GOLGA6L9A6NEM1 432 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 GOLGA8JA6NMD2 632 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 CYB561D2O14569 222 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 ZNF263O14978 683 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 EIF3DO15371 548 aaKnown RBP eCLIP10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 MICAL2O94851 1124 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 PRAMEF12O95522 483 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 CHRNB1P11230 501 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 TYMPP19971 482 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 GABRR2P28476 465 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 SATB1Q01826 763 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 TNK2Q07912 1038 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 ALCAMQ13740 583 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 BMT2Q1RMZ1 405 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 FKBP15Q5T1M5 1219 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 Q6ZS52 159 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 ZNF720Q7Z2F6 126 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 MFSD6LQ8IWD5 586 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 ELMOD1Q8N336 334 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 ZBTB44Q8NCP5 570 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 GLIS3Q8NEA6 775 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 RIN3Q8TB24 985 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 NELL1Q92832 810 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 HPS3Q969F9 1004 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 STRA6Q9BX79 667 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 ATXN3LQ9H3M9 355 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 DPP3Q9NY33 737 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 GTSE1Q9NYZ3 720 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 RALYQ9UKM9 306 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 FBXO4Q9UKT5 387 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 AGO2Q9UKV8 859 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 DNAH14Q0VDD8 3507 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
TMEM39A-208ENST00000486159 TRIM49BA6NDI0 452 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 OR6C75A6NL08 312 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 H0YCG3 227 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ZSCAN12O43309 604 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 LILRB5O75023 590 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ODC1P11926 461 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 TGM1P22735 817 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 FECHP22830 423 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ACAT1P24752 427 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 RPL13P26373 211 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 MTIF2P46199 727 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ALDH1A3P47895 512 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 PMS1P54277 932 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 EPHB3P54753 998 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 MARSP56192 900 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 UBXN1Q04323 297 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 PLD1Q13393 1074 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 MYBPC2Q14324 1141 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 NFIL3Q16649 462 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 MAN2A1Q16706 1144 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 MGAT5BQ3V5L5 792 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ZCWPW2Q504Y3 356 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 HSP90AA4PQ58FG1 418 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 FIGNQ5HY92 759 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 DNTTIP2Q5QJE6 756 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms