RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 GRPP07492 148 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 NPSP0C0P6 89 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 E2F2Q14209 437 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 ZIK1Q3SY52 487 aaPredicted RBP5.04□□□□□ -1.6
GCFC2-209ENST00000486016 AMOTQ4VCS5 1084 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 BRDTQ58F21 947 aaPredicted RBP5.04□□□□□ -1.6
GCFC2-209ENST00000486016 ATAT1Q5SQI0 421 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 KIRREL2Q6UWL6 708 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 PNLDC1Q8NA58 520 aaKnown RBP5.04□□□□□ -1.6
GCFC2-209ENST00000486016 CHMP4CQ96CF2 233 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 CDK5RAP3Q96JB5 506 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 NUP88Q99567 741 aaPredicted RBP5.04□□□□□ -1.6
GCFC2-209ENST00000486016 TMEM79Q9BSE2 394 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 CXorf36Q9H7Y0 433 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 PDGFCQ9NRA1 345 aa5.04□□□□□ -1.6
GCFC2-209ENST00000486016 MRPS17Q9Y2R5 130 aaKnown RBP5.04□□□□□ -1.6
GCFC2-209ENST00000486016 TCRBV5S1A1TA0A578 114 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 IGSF3O75054 1194 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 NTN1O95631 604 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 IL33O95760 270 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 BMP15O95972 392 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 NR4A2P43354 598 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 ARFIP2P53365 341 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 PDE1AP54750 535 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 UCP3P55916 312 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 MYO1EQ12965 1108 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 CYP1B1Q16678 543 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 KHDC1LQ5JSQ8 128 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 MTHFD1LQ6UB35 978 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 KRT73Q86Y46 540 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 ZNF280BQ86YH2 543 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 CGRRF1Q99675 332 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 ANLNQ9NQW6 1124 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 TUBA8Q9NY65 449 aaPredicted RBP5.03□□□□□ -1.6
GCFC2-209ENST00000486016 ELOVL5Q9NYP7 299 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 TBC1D30Q9Y2I9 924 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 LUC7L2Q9Y383 392 aaKnown RBP5.03□□□□□ -1.6
GCFC2-209ENST00000486016 COL4A3BPQ9Y5P4 624 aa5.03□□□□□ -1.6
GCFC2-209ENST00000486016 KCNU1A8MYU2 1149 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 TRIM38O00635 465 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 PDE8BO95263 885 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 SLC11A2P49281 568 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 FOXG1P55316 489 aaPredicted RBP5.02□□□□□ -1.61
GCFC2-209ENST00000486016 AWAT2Q6E213 333 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 TECPR1Q7Z6L1 1165 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 TERB1Q8NA31 727 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 ABHD11Q8NFV4 315 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 SNX18Q96RF0 628 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 VPS16Q9H269 839 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 SHOC2Q9UQ13 582 aa5.02□□□□□ -1.61
GCFC2-209ENST00000486016 WDR17Q8IZU2 1322 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 A0A088AWK7 358 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 E5RJQ4 531 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 POC1B-GALNT4F8VUJ3 575 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 THP07101 528 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 LRPAP1P30533 357 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 ARHGAP25P42331 645 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 PDE6CP51160 858 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 DGKEP52429 567 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 WNT3P56703 355 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 LAMB3Q13751 1172 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 TBC1D25Q3MII6 688 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 RNASE12Q5GAN4 147 aaKnown RBP5.01□□□□□ -1.61
GCFC2-209ENST00000486016 GAS2L3Q86XJ1 694 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 ABRAQ8N0Z2 381 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 GALNT4Q8N4A0 578 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 XAGE5Q8WWM1 108 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 DAZAP1Q96EP5 407 aaKnown RBP5.01□□□□□ -1.61
GCFC2-209ENST00000486016 SARS2Q9NP81 518 aaKnown RBP5.01□□□□□ -1.61
GCFC2-209ENST00000486016 STXBP5LQ9Y2K9 1186 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.01□□□□□ -1.61
GCFC2-209ENST00000486016 FER1L4A9Z1Z3 1794 aa5.01□□□□□ -1.61
GCFC2-209ENST00000486016 A0A087WWL8 130 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 ABLIM3O94929 683 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 CYP2A6P11509 494 aaPredicted RBP5□□□□□ -1.61
GCFC2-209ENST00000486016 CYP2C9P11712 490 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 KCNA3P22001 575 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 ADORA2AP29274 412 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 TPTEP56180 551 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 GPSM2P81274 684 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 GTF2H3Q13889 308 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 TRIP6Q15654 476 aaKnown RBP5□□□□□ -1.61
GCFC2-209ENST00000486016 LY6KQ17RY6 165 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 LCE1EQ5T753 118 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 ZNF398Q8TD17 642 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 C1GALT1C1Q96EU7 318 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 MAP3K14Q99558 947 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 P2RX7Q99572 595 aaKnown RBP5□□□□□ -1.61
GCFC2-209ENST00000486016 DPH1Q9BZG8 443 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 ASIC5Q9NY37 505 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 TMX2Q9Y320 296 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 SNX14Q9Y5W7 946 aa5□□□□□ -1.61
GCFC2-209ENST00000486016 FCHO1O14526 889 aa4.99□□□□□ -1.61
GCFC2-209ENST00000486016 CHRM5P08912 532 aaPredicted RBP4.99□□□□□ -1.61
GCFC2-209ENST00000486016 ATP5F1P24539 256 aaPredicted RBP4.99□□□□□ -1.61
GCFC2-209ENST00000486016 FPR3P25089 353 aa4.99□□□□□ -1.61
GCFC2-209ENST00000486016 KCNJ5P48544 419 aa4.99□□□□□ -1.61
GCFC2-209ENST00000486016 RENBPP51606 427 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms