RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 DTWD2Q8NBA8 298 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ZSCAN18Q8TBC5 510 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 MYCBPAPQ8TBZ2 947 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ING5Q8WYH8 240 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 CLDN23Q96B33 292 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 CCDC127Q96BQ5 260 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 MSANTD3Q96H12 275 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ZSWIM3Q96MP5 696 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 FAM124BQ9H5Z6 455 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 ZNF334Q9HCZ1 680 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 RMND1Q9NWS8 449 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 MAGEC2Q9UBF1 373 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 NUP210Q8TEM1 1887 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 ZFHX2Q9C0A1 2572 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 MIA3Q5JRA6 1907 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 EP300Q09472 2414 aaPredicted RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 MYBPHLA2RUH7 354 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SHISA7A6NL88 538 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 HEPACAM2A8MVW5 462 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ARNTLO00327 626 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 PHACTR2O75167 634 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 NOL4O94818 638 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SMC2O95347 1197 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 VNN1O95497 513 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 TCF3P15923 654 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 PTPN1P18031 435 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 CYP2F1P24903 491 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 GABRR2P28476 465 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 PSMC2P35998 433 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 PPP1R2P41236 205 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 NBL1P41271 181 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 CASP4P49662 377 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 VAMP7P51809 220 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 NLRP12P59046 1061 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 MYL6P60660 151 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 PLCB2Q00722 1185 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ADAM9Q13443 819 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ARHGAP29Q52LW3 1261 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 C1orf220Q5T0J3 134 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ZNF658Q5TYW1 1059 aaPredicted RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 TDRD10Q5VZ19 366 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 VITQ6UXI7 678 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ZNF852Q6ZMS4 543 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SV2AQ7L0J3 742 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 MON1AQ86VX9 555 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 UNC93AQ86WB7 457 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SPATA2LQ8IUW3 424 aaPredicted RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 ZC3H3Q8IXZ2 948 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 CMTM8Q8IZV2 173 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 CELF5Q8N6W0 485 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 FLCNQ8NFG4 579 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 PJA1Q8NG27 643 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 NOC3LQ8WTT2 800 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 C8orf48Q96LL4 319 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 MMS19Q96T76 1030 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SEPT5Q99719 369 aaPredicted RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 KXD1Q9BQD3 176 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SYT15Q9BQS2 421 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 IER2Q9BTL4 223 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 PI4K2AQ9BTU6 479 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 TTLL2Q9BWV7 592 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SLC46A2Q9BY10 475 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SNX25Q9H3E2 840 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ATXN3LQ9H3M9 355 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 SEMA4AQ9H3S1 761 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 C8orf33Q9H7E9 229 aaPredicted RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 TBC1D17Q9HA65 648 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 COMMD8Q9NX08 183 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 ABI2Q9NYB9 513 aaPredicted RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 IL37Q9NZH6 218 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 EHD2Q9NZN4 543 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 HOOK1Q9UJC3 728 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 CA14Q9ULX7 337 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 MRPS17Q9Y2R5 130 aaKnown RBP7.48□□□□□ -1.21
VPS50-218ENST00000485994 PCDHA5Q9Y5H7 936 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 MYH10P35580 1976 aa7.48□□□□□ -1.21
VPS50-218ENST00000485994 OBSL1O75147 1896 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 FAM170BA6NMN3 283 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 SLC38A8A6NNN8 435 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 ZNF263O14978 683 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 TRIM66O15016 1216 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 PMM2O15305 246 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 ATP2C2O75185 946 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 SOAT2O75908 522 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 AKAP3O75969 853 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 ASS1P00966 412 aaKnown RBP7.47□□□□□ -1.21
VPS50-218ENST00000485994 PDGFRBP09619 1106 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 P4HA1P13674 534 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 GJA1P17302 382 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 NR2F2P24468 414 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 ACAT1P24752 427 aaKnown RBP7.47□□□□□ -1.21
VPS50-218ENST00000485994 VIPR2P41587 438 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 TNNC1P63316 161 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 NOP14P78316 857 aaKnown RBP7.47□□□□□ -1.21
VPS50-218ENST00000485994 DLG4P78352 724 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 FKBP3Q00688 224 aaKnown RBP7.47□□□□□ -1.21
VPS50-218ENST00000485994 NCOA4Q13772 614 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms