RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 UBA6A0AVT1 1052 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 KRT87PA6NCN2 255 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 RHPN2P1A8MT19 583 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PI4K2BG5E9Z4 385 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 DDX39AO00148 427 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 CAPN9O14815 690 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PSMA7O14818 248 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CETN3O15182 167 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 HTRA2O43464 458 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 PPP1R11O60927 126 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 SRGAP2O75044 1071 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 FKTNO75072 461 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 OPN1MWP04001 364 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CSTBP04080 98 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 CHGBP05060 677 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 S100A6P06703 90 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CLTBP09497 229 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 OPN1MW2P0DN77 364 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 OPN1MW3P0DN78 364 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 TMEM11P17152 192 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PTPN1P18031 435 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 LAG3P18627 525 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 TFEBP19484 476 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 EDNRBP24530 442 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 FPR2P25090 351 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 RPL10P27635 214 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 ALDH1B1P30837 517 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PIK3CBP42338 1070 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 TECP42680 631 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 SLC6A11P48066 632 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PRIM2P49643 509 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 ETV1P50549 477 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 FXR1P51114 621 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTN4-213ENST00000485749 MAPK10P53779 464 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 NLRP5P59047 1200 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 KIF5AQ12840 1032 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 ADAM15Q13444 863 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 SMAD1Q15797 465 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 KRT71Q3SY84 523 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 BOLA3Q53S33 107 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 KAZNQ674X7 775 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PPP1R21Q6ZMI0 780 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 RGS9BPQ6ZS82 235 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 B4GALNT4Q76KP1 1039 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 KANSL1Q7Z3B3 1105 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 NUP54Q7Z3B4 507 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 SPATA2LQ8IUW3 424 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 SP8Q8IXZ3 490 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CCDC13Q8IYE1 715 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 ANKRD52Q8NB46 1076 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 BBOF1Q8ND07 529 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 DENND6BQ8NEG7 585 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 ZMIZ2Q8NF64 920 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 MOSPD2Q8NHP6 518 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 RFWD2Q8NHY2 731 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 KLHDC4Q8TBB5 520 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 OTUD7AQ8TE49 926 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 RUBCNQ92622 972 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 NOL10Q9BSC4 688 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 DDX23Q9BUQ8 820 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 STK31Q9BXU1 1019 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 ACE2Q9BYF1 805 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 TNMDQ9H2S6 317 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 MRPL46Q9H2W6 279 aaKnown RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 VCX3BQ9H321 246 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 VCPKMTQ9H867 229 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CCDC177Q9NQR7 707 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 BTG4Q9NY30 223 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 GPRC5BQ9NZH0 403 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 CCNB3Q8WWL7 1395 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTN4-213ENST00000485749 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ST20-MTHFSA0A0A6YYL1 179 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CLRN2A0PK11 232 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CCDC154A6NI56 674 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 LACTBL1A8MY62 500 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 EBAG9O00559 213 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 DDX3XO00571 662 aaKnown RBP eCLIP4.85□□□□□ -1.63
RTN4-213ENST00000485749 DIAPH2O60879 1101 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ERLIN1O75477 346 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 URI1O94763 535 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 PRPF6O94906 941 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 FUCA1P04066 466 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 HEXBP07686 556 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CLEC2LP0C7M8 214 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CKBP12277 381 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ALAS1P13196 640 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 SFPQP23246 707 aaKnown RBP eCLIP4.85□□□□□ -1.63
RTN4-213ENST00000485749 TNFSF4P23510 183 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 S100A5P33763 92 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 HSD17B2P37059 387 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 KIR2DL1P43626 348 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 KIR2DL2P43627 348 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 GPR15P49685 360 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms