RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 KRT3P12035 628 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 CCDC130P13994 396 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 TYMPP19971 482 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 COMTP21964 271 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 ACAT1P24752 427 aaKnown RBP10.06□□□□□ -0.8
CTSA-208ENST00000485627 SSR1P43307 286 aaKnown RBP10.06□□□□□ -0.8
CTSA-208ENST00000485627 ACADSBP45954 432 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 BRCC3P46736 316 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 AARSP49588 968 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTSA-208ENST00000485627 DSC1Q08554 894 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 MDH1BQ5I0G3 518 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 CYP4A22Q5TCH4 519 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 OR6B2Q6IFH4 312 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 ZNF280BQ86YH2 543 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 COLGALT2Q8IYK4 626 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 TMEM199Q8N511 208 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 ANKRD52Q8NB46 1076 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 C3orf20Q8ND61 904 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 C3orf58Q8NDZ4 430 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 SLC2A14Q8TDB8 520 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 HASPINQ8TF76 798 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 BTBD6Q96KE9 485 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 CASD1Q96PB1 797 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 CPXM1Q96SM3 734 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 COLEC11Q9BWP8 271 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 PLVAPQ9BX97 442 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 PRKAG2Q9UGJ0 569 aa10.06□□□□□ -0.8
CTSA-208ENST00000485627 PRG3Q9Y2Y8 225 aaPredicted RBP10.06□□□□□ -0.8
CTSA-208ENST00000485627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTSA-208ENST00000485627 DNAH12Q6ZR08 3092 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 ABHD14A-ACY1A0A1B0GW23 586 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 SIGLEC16A6NMB1 481 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 TMEM189-UBE2V1I3L0A0 370 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 M0QZQ0 153 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 ZNF185O15231 689 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 HCRTO43612 131 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 CEP104O60308 925 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 EFCAB14O75071 495 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 PROSCO94903 275 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 UPP2O95045 317 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 ALDH2P05091 517 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 CYP11A1P05108 521 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 FAM200BP0CF97 657 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 GABRB2P47870 512 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 RGS7P49802 495 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 GSCP56915 257 aaPredicted RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 TSPY1Q01534 308 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 PDE4CQ08493 712 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 PIGHQ14442 188 aaPredicted RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 MAPRE1Q15691 268 aaKnown RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 CLUL1Q15846 466 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 TEX35Q5T0J7 233 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 FAM102AQ5T9C2 384 aaPredicted RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 SEL1L2Q5TEA6 688 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 OVOS1Q6IE37 1185 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 CCDC70Q6NSX1 233 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 COG1Q8WTW3 980 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 STK32AQ8WU08 396 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 HES6Q96HZ4 224 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 HSFY1Q96LI6 401 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 MCEEQ96PE7 176 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 NAP1L3Q99457 506 aaPredicted RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 HNRNPABQ99729 332 aaKnown RBP10.05□□□□□ -0.8
CTSA-208ENST00000485627 ACBD6Q9BR61 282 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 CYTH4Q9UIA0 394 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 USTQ9Y2C2 406 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
CTSA-208ENST00000485627 TMEM191CA6NGB0 347 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 E5RJQ4 531 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 I3L4J1 428 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 PGRMC1O00264 195 aaKnown RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 DYNC1I1O14576 645 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 XPO1O14980 1071 aaKnown RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 CTIFO43310 598 aaKnown RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 ATP2C2O75185 946 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 TADA3O75528 432 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 AMHP03971 560 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 ERBB2P04626 1255 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 PFKMP08237 780 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 IGFBP6P24592 240 aaPredicted RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 PSMA2P25787 234 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 CTNNA2P26232 953 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 MAN1A1P33908 653 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 RWDD2BP57060 319 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 YWHAHQ04917 246 aaPredicted RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 ELAVL2Q12926 359 aaKnown RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 ODF2Q5BJF6 829 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 ZFYVE27Q5T4F4 411 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 FAM109BQ6ICB4 259 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms