RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 EPSTI1Q96J88 318 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 B3GALT6Q96L58 329 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ZMAT2Q96NC0 199 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ACCSQ96QU6 501 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 GPR88Q9GZN0 384 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 GZF1Q9H116 711 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 TNMDQ9H2S6 317 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 KIAA1586Q9HCI6 787 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 AFF4Q9UHB7 1163 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 AGO2Q9UKV8 859 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 TRIM33Q9UPN9 1127 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 R3HCC1Q9Y3T6 440 aaKnown RBP6.67□□□□□ -1.34
PTCD3-215ENST00000484203 ATP6V1DQ9Y5K8 247 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 CLIC4Q9Y696 253 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 CDY1Q9Y6F8 540 aa6.67□□□□□ -1.34
PTCD3-215ENST00000484203 NPHP3-ACAD11A0A0J9YXS1 232 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 LACTBL1A8MY62 500 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ANHXE9PGG2 379 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 TBC1D4O60343 1298 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CUTAO60888 179 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SPATA31D3P0C874 917 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CXCL8P10145 99 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ODC1P11926 461 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 IDEP14735 1019 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 PTPN2P17706 415 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 RPL17P18621 184 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 GARTP22102 1010 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 TKTP29401 623 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 AARSP49588 968 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SOX4Q06945 474 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 TMEM132DQ14C87 1099 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SURF1Q15526 300 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ENOX2Q16206 610 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 PRRT3Q5FWE3 981 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SPATA1Q5VX52 437 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CNNM4Q6P4Q7 775 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 DSTYKQ6XUX3 929 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SPATA31D4Q6ZUB0 917 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 GET4Q7L5D6 327 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 METTL23Q86XA0 190 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SYCP3Q8IZU3 236 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 THEM5Q8N1Q8 247 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SLC44A3Q8N4M1 653 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SPATA18Q8TC71 538 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 C2orf15Q8WU43 125 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 POMGNT1Q8WZA1 660 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 RABGGTAQ92696 567 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 E2F7Q96AV8 911 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ALKBH8Q96BT7 664 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 BORCS6Q96GS4 357 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CCDC34Q96HJ3 373 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ZBTB45Q96K62 511 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF512Q96ME7 567 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 LACRTQ9GZZ8 138 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CYP4F11Q9HBI6 524 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 SLC2A4RGQ9NR83 387 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 LATS2Q9NRM7 1088 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CGNQ9P2M7 1197 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 FBXL5Q9UKA1 691 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 CPSF3Q9UKF6 684 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 MRPS23Q9Y3D9 190 aaKnown RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ASB3Q9Y575 518 aa6.66□□□□□ -1.34
PTCD3-215ENST00000484203 ZFHX2Q9C0A1 2572 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-215ENST00000484203 FNDC1Q4ZHG4 1894 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 FRMD3A2A2Y4 597 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 MYMKA6NI61 221 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 EIF1AYO14602 144 aaKnown RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 EIF3DO15371 548 aaKnown RBP eCLIP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 CCL16O15467 120 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 FAM189A1O60320 539 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 GCNT3O95395 438 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 CYP11A1P05108 521 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 MYL1P05976 194 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ASGR2P07307 311 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ZSCAN22P10073 491 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 NMT1P30419 496 aaKnown RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 MAGEA9P43362 315 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 BRCC3P46736 316 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ALDH1A3P47895 512 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 TUFMP49411 452 aaKnown RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 EPHB3P54753 998 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 LILRA4P59901 499 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ROR1Q01973 937 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 NHLH1Q02575 133 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 CEBPZQ03701 1054 aaKnown RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 PRKCQQ04759 706 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 GPR17Q13304 367 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 VEPH1Q14D04 833 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 OVOS1Q6IE37 1185 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 C1orf228Q6PIY5 440 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 CD300LGQ6UXG3 332 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 RSPO2Q6UXX9 243 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 PDZD4Q76G19 769 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 DYMQ7RTS9 669 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 GRASPQ7Z6J2 395 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ITIH5Q86UX2 942 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 SFR1Q86XK3 245 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms