RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 MYO1EQ12965 1108 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 GAREM2Q75VX8 874 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 WDR5BQ86VZ2 330 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 TTC9BQ8N6N2 239 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 BPIFB1Q8TDL5 484 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 DHTKD1Q96HY7 919 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 CGRRF1Q99675 332 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 SEPT5Q99719 369 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 LPIN3Q9BQK8 851 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 MKNK1Q9BUB5 465 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 PDE11AQ9HCR9 933 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 RXFP3Q9NSD7 469 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 THG1LQ9NWX6 298 aaKnown RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 SLC8A2Q9UPR5 921 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 TPRP12270 2363 aaKnown RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 KPNA7A9QM74 516 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 PSMA7O14818 248 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 PPEF2O14830 753 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 RPP40O75818 363 aaKnown RBP10.71□□□□□ -0.69
CPSF4-213ENST00000484112 PRAMEF12O95522 483 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 STAU1O95793 577 aaKnown RBP10.71□□□□□ -0.69
CPSF4-213ENST00000484112 TNNI1P19237 187 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 NR2F2P24468 414 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 SMARCB1Q12824 385 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 CCINQ13939 588 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 TAF12Q16514 161 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 MGAT5BQ3V5L5 792 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 ZCWPW2Q504Y3 356 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 PKN3Q6P5Z2 889 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 INTS8Q75QN2 995 aaKnown RBP10.71□□□□□ -0.69
CPSF4-213ENST00000484112 DPH6Q7L8W6 267 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 CACNA2D4Q7Z3S7 1137 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 ITIH5Q86UX2 942 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 KBTBD6Q86V97 674 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 METTL23Q86XA0 190 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 TMEM86AQ8N2M4 240 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 SYNPOQ8N3V7 929 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 CSGALNACT2Q8N6G5 542 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 C1orf127Q8N9H9 656 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 ZSWIM2Q8NEG5 633 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 GIPC2Q8TF65 315 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 GAB3Q8WWW8 586 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 PSMG2Q969U7 264 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 GCNAQ96QF7 691 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 TSG101Q99816 390 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 SMOC1Q9H4F8 434 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 TASP1Q9H6P5 420 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 GDAP2Q9NXN4 497 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 HSFX1Q9UBD0 423 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 RALYQ9UKM9 306 aaKnown RBP10.71□□□□□ -0.69
CPSF4-213ENST00000484112 ASB3Q9Y575 518 aa10.71□□□□□ -0.69
CPSF4-213ENST00000484112 BICDL2A1A5D9 508 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 TULP1O00294 542 aaPredicted RBP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 CETN3O15182 167 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 FGF19O95750 216 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 ITGB3P05106 788 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 ZNF806P0C7X5 589 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 ATICP31939 592 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 PSMC2P35998 433 aaKnown RBP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 PRCPP42785 496 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 FKBP3Q00688 224 aaKnown RBP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 GRSF1Q12849 480 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 ADAM9Q13443 819 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 VEPH1Q14D04 833 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 SLC39A12Q504Y0 691 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 STPG1Q5TH74 334 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 THEM5Q8N1Q8 247 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 TOP6BLQ8N6T0 577 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 CXorf38Q8TB03 319 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 PARD3BQ8TEW8 1205 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 NOC3LQ8WTT2 800 aaKnown RBP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 C2orf15Q8WU43 125 aaKnown RBP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 SENP8Q96LD8 212 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 MTMR12Q9C0I1 747 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 GKN1Q9NS71 199 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 POLR3BQ9NW08 1133 aaPredicted RBP10.7□□□□□ -0.7
CPSF4-213ENST00000484112 OBP2AQ9NY56 170 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 AGAP1Q9UPQ3 857 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 RALGAPA1Q6GYQ0 2036 aa10.7□□□□□ -0.7
CPSF4-213ENST00000484112 CYB561D2O14569 222 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 SLC16A3O15427 465 aaKnown RBP10.69□□□□□ -0.7
CPSF4-213ENST00000484112 STX10O60499 249 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 HUS1O60921 280 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 ATG13O75143 517 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 EPN2O95208 641 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 DLATP10515 647 aaKnown RBP10.69□□□□□ -0.7
CPSF4-213ENST00000484112 KRT13P13646 458 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 PMLP29590 882 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 CDC25CP30307 473 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 POLR2BP30876 1174 aaKnown RBP10.69□□□□□ -0.7
CPSF4-213ENST00000484112 HOXA6P31267 233 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 GTF2H1P32780 548 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 TUFMP49411 452 aaKnown RBP10.69□□□□□ -0.7
CPSF4-213ENST00000484112 LIMK1P53667 647 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 WNT7BP56706 349 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 MORC3Q14149 939 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms