RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 BAIAP3O94812 1187 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CLSTN1O94985 981 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ZRANB2O95218 330 aaKnown RBP eCLIP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 NPTXRO95502 500 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 FTCDO95954 541 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CALB1P05937 261 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 NFICP08651 508 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 WEE2P0C1S8 567 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 VDRP11473 427 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ZSCAN20P17040 1043 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ABCB4P21439 1286 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 MMP8P22894 467 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CTNNA2P26232 953 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 GNA15P30679 374 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 POLR2BP30876 1174 aaKnown RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PNPLA4P41247 253 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PEX5P50542 639 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 GSCP56915 257 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 SNX16P57768 344 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 OSTNP61366 133 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 NOMO3P69849 1222 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 IRX5P78411 483 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 MRPS6P82932 125 aaKnown RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 INCA1Q0VD86 236 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 STILQ15468 1287 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 FAM26DQ5JW98 314 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TEX35Q5T0J7 233 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 UBXN11Q5T124 520 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TAF3Q5VWG9 929 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TMCO3Q6UWJ1 677 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 UNQ6494/PRO21346Q6UXR6 183 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CCNI2Q6ZMN8 369 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 RUFY4Q6ZNE9 571 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 MON1BQ7L1V2 547 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 DPH6Q7L8W6 267 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 LIMS2Q7Z4I7 341 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 MRPL10Q7Z7H8 261 aaKnown RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 UNC93AQ86WB7 457 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 GPIHBP1Q8IV16 184 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM192Q8IY95 271 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 UBALD2Q8IYN6 164 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 KDF1Q8NAX2 398 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 DTWD2Q8NBA8 298 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 BEST2Q8NFU1 509 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF564Q8TBZ8 553 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CD101Q93033 1021 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ARHGEF26Q96DR7 871 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CYFIP2Q96F07 1278 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM176AQ96HP8 235 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF668Q96K58 619 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PKNOX2Q96KN3 472 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 OSMRQ99650 979 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ARID3AQ99856 593 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 NUP85Q9BW27 656 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PHF7Q9BWX1 381 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PLVAPQ9BX97 442 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 MIS12Q9H081 205 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ARFGAP3Q9NP61 516 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ACP6Q9NPH0 428 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PARVAQ9NVD7 372 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 GDAP2Q9NXN4 497 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 ADAM22Q9P0K1 906 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 WDR35Q9P2L0 1181 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CNOT8Q9UFF9 292 aaKnown RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 STRIP2Q9ULQ0 834 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 BARX2Q9UMQ3 279 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-206ENST00000483876 CEP83Q9Y592 693 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 PCDHA3Q9Y5H8 950 aa5.74□□□□□ -1.49
COL17A1-206ENST00000483876 TCRBV5S1A1TA0A578 114 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SIGLEC16A6NMB1 481 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 EIF4E1BA6NMX2 242 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 H3BNC9 293 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 PGRMC1O00264 195 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 ZZEF1O43149 2961 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 THAP12O43422 761 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CEP104O60308 925 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 KRT38O76015 456 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 GJB5O95377 273 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 ITGB3P05106 788 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 KRT19P08727 400 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SKIP12755 728 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 COMTP21964 271 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 TNFRSF8P28908 595 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 LRPAP1P30533 357 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 MAN1A1P33908 653 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CTNNA1P35221 906 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 RFC2P35250 354 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 GABRB2P47870 512 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 NDUFV1P49821 464 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 RAB27AP51159 221 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CLCN6P51797 869 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 RAD23BP54727 409 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 WDR5P61964 334 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 TNNC1P63316 161 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 HYAL1Q12794 435 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 PTK7Q13308 1070 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 GPM6BQ13491 265 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 MAMLD1Q13495 774 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms