RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TTC16Q8NEE8 873 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 PLEKHO2Q8TD55 490 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 MYLPFQ96A32 169 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 CCDC127Q96BQ5 260 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 TRMT2BQ96GJ1 504 aaKnown RBP19.29■□□□□ 0.68
ATG4B-221ENST00000483778 CHAMP1Q96JM3 812 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 TRPC7Q9HCX4 862 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 SLC39A2Q9NP94 309 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 TMEM30AQ9NV96 361 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 MYH10P35580 1976 aa19.29■□□□□ 0.68
ATG4B-221ENST00000483778 PAPSS2O95340 614 aaPredicted RBP19.28■□□□□ 0.68
ATG4B-221ENST00000483778 EGFP01133 1207 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 WARSP23381 471 aaKnown RBP19.28■□□□□ 0.68
ATG4B-221ENST00000483778 DDX6P26196 483 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATG4B-221ENST00000483778 PCSK1P29120 753 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 GALK1P51570 392 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 CACNA2D1P54289 1103 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 ZXDBP98169 803 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 AMPD3Q01432 767 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 CYP24A1Q07973 514 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 PUM1Q14671 1186 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATG4B-221ENST00000483778 C1orf228Q6PIY5 440 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 STXBP4Q6ZWJ1 553 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 UNC13DQ70J99 1090 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 DPH6Q7L8W6 267 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 WDR49Q8IV35 697 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 SPATA18Q8TC71 538 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 EZH1Q92800 747 aaPredicted RBP19.28■□□□□ 0.68
ATG4B-221ENST00000483778 MMS19Q96T76 1030 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 LRRC27Q9C0I9 530 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 LINC00597Q9H2U6 94 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 MAGEC2Q9UBF1 373 aaPredicted RBP19.28■□□□□ 0.68
ATG4B-221ENST00000483778 CDH9Q9ULB4 789 aa19.28■□□□□ 0.68
ATG4B-221ENST00000483778 ANTXRLA6NF34 631 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 TRDMT1O14717 391 aaKnown RBP19.27■□□□□ 0.68
ATG4B-221ENST00000483778 F13A1P00488 732 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 MAGEA11P43364 429 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 CASP4P49662 377 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 SIM2Q14190 667 aaPredicted RBP19.27■□□□□ 0.68
ATG4B-221ENST00000483778 PPP2R5DQ14738 602 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 PSMD6Q15008 389 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 SURF1Q15526 300 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 RESP18Q5W5W9 173 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 DPEP3Q9H4B8 488 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 KIAA1586Q9HCI6 787 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 SERTAD1Q9UHV2 236 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 WNT6Q9Y6F9 365 aa19.27■□□□□ 0.68
ATG4B-221ENST00000483778 TNNI1P19237 187 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 GNL1P36915 607 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 ATXN1P54253 815 aaKnown RBP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 MYL6P60660 151 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 CYP27A1Q02318 531 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 ZNF268Q14587 947 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 ZNF77Q15935 545 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 MDH1BQ5I0G3 518 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 LONP2Q86WA8 852 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 XXYLT1Q8NBI6 393 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 PCED1BQ96HM7 432 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 FUBP3Q96I24 572 aaKnown RBP eCLIP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 CGRRF1Q99675 332 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 UXTQ9UBK9 157 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 ZMYM5Q9UJ78 669 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 USP18Q9UMW8 372 aa19.26■□□□□ 0.67
ATG4B-221ENST00000483778 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 MYO18AQ92614 2054 aaKnown RBP19.26■□□□□ 0.67
ATG4B-221ENST00000483778 ABCA7Q8IZY2 2146 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 SOBPA7XYQ1 873 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 CLDN5O00501 218 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 KLRC4O43908 158 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 GJA4P35212 333 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 GRIK1P39086 918 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 ME1P48163 572 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 DNM1Q05193 864 aaKnown RBP19.25■□□□□ 0.67
ATG4B-221ENST00000483778 FAM160A1Q05DH4 1040 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 MTF1Q14872 753 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 LAIR1Q6GTX8 287 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 SYNPOQ8N3V7 929 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 MYCBPAPQ8TBZ2 947 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 SH3RF2Q8TEC5 729 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 RNF38Q9H0F5 515 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 ECT2Q9H8V3 914 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 KIF9Q9HAQ2 790 aa19.25■□□□□ 0.67
ATG4B-221ENST00000483778 DUS2Q9NX74 493 aaKnown RBP19.25■□□□□ 0.67
ATG4B-221ENST00000483778 R3HCC1Q9Y3T6 440 aaKnown RBP19.25■□□□□ 0.67
ATG4B-221ENST00000483778 TRAV19A0A0A6YYK7 116 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 CKMP06732 381 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 USP17L7P0C7H9 530 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 PTPN1P18031 435 aaKnown RBP19.24■□□□□ 0.67
ATG4B-221ENST00000483778 HDCP19113 662 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 HOXA6P31267 233 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 CDH8P55286 799 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 USP4Q13107 963 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 BMT2Q1RMZ1 405 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 EML3Q32P44 896 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 WDR72Q3MJ13 1102 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 CC2D1AQ6P1N0 951 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-221ENST00000483778 C4orf50Q6ZRC1 276 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 OR6B3Q8NGW1 331 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 SECISBP2LQ93073 1101 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms