RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 GPIHBP1Q8IV16 184 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 MYLPFQ96A32 169 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 ZFYVE19Q96K21 471 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 SPATA32Q96LK8 384 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 EPC1Q9H2F5 836 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 SNX25Q9H3E2 840 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 DMAC2Q9NW81 257 aa21.21■□□□□ 0.99
HPS4-213ENST00000483631 WDR87Q6ZQQ6 2873 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 PDXKO00764 312 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 TRIM66O15016 1216 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 HCRTO43612 131 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 TCF3P15923 654 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 CXCL12P48061 93 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 SOX9P48436 509 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 CCINQ13939 588 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 PDGFRLQ15198 375 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 WDR72Q3MJ13 1102 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 TXNDC11Q6PKC3 985 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 SCN4BQ8IWT1 228 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 GRAMD1CQ8IYS0 662 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 SPRYD3Q8NCJ5 442 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 KIAA0895Q8NCT3 520 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 PARD3BQ8TEW8 1205 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 ZNF516Q92618 1163 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 PCED1BQ96HM7 432 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 SMG9Q9H0W8 520 aaKnown RBP21.2■□□□□ 0.98
HPS4-213ENST00000483631 XYLT2Q9H1B5 865 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 GKN1Q9NS71 199 aa21.2■□□□□ 0.98
HPS4-213ENST00000483631 HELZP42694 1942 aaKnown RBP21.19■□□□□ 0.98
HPS4-213ENST00000483631 TRAV19A0A0A6YYK7 116 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 A0A1B0GVL5 298 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 ATP2C2O75185 946 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 KIF20AO95235 890 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 USP17L7P0C7H9 530 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 PPP3CCP48454 512 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 PSMC1P62191 440 aaKnown RBP21.19■□□□□ 0.98
HPS4-213ENST00000483631 RUNX3Q13761 415 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 CCDC142Q17RM4 750 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 KMT5BQ4FZB7 885 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 CC2D1AQ6P1N0 951 aaPredicted RBP21.19■□□□□ 0.98
HPS4-213ENST00000483631 DENND5BQ6ZUT9 1274 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 KIAA1958Q8N8K9 716 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 C8orf48Q96LL4 319 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 MRPL45Q9BRJ2 306 aaKnown RBP21.19■□□□□ 0.98
HPS4-213ENST00000483631 TTLL2Q9BWV7 592 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 SCAND2PQ9GZW5 306 aaPredicted RBP21.19■□□□□ 0.98
HPS4-213ENST00000483631 KCTD10Q9H3F6 313 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 CCL26Q9Y258 94 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 ZDHHC9Q9Y397 364 aa21.19■□□□□ 0.98
HPS4-213ENST00000483631 PDGFRBP09619 1106 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 BDNFP23560 247 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 ANXA13P27216 316 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 GRIK1P39086 918 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 NOP14P78316 857 aaKnown RBP21.18■□□□□ 0.98
HPS4-213ENST00000483631 FOXK2Q01167 660 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 TNK2Q07912 1038 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 GAS6Q14393 721 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 TSSK4Q6SA08 328 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 GPR161Q8N6U8 529 aaKnown RBP21.18■□□□□ 0.98
HPS4-213ENST00000483631 OR6B3Q8NGW1 331 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 EXOC4Q96A65 974 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 ELOVL4Q9GZR5 314 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 HPS4Q9NQG7 708 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 GCNT4Q9P109 453 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 CEP250Q9BV73 2442 aa21.18■□□□□ 0.98
HPS4-213ENST00000483631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.17■□□□□ 0.98
HPS4-213ENST00000483631 A0A1W2PQ27 194 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 A0A1W2PQ64 194 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 A0A1W2PQD8 194 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 PHACTR2O75167 634 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 PTPN1P18031 435 aaKnown RBP21.17■□□□□ 0.98
HPS4-213ENST00000483631 HOXA6P31267 233 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 SYKP43405 635 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 MYL6P60660 151 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 CYP27A1Q02318 531 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 USP4Q13107 963 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 PON2Q15165 354 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 ZNF77Q15935 545 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 STKLD1Q8NE28 680 aa21.17■□□□□ 0.98
HPS4-213ENST00000483631 SECISBP2LQ93073 1101 aaKnown RBP21.17■□□□□ 0.98
HPS4-213ENST00000483631 CCDC47Q96A33 483 aaKnown RBP21.17■□□□□ 0.98
HPS4-213ENST00000483631 TRDMT1O14717 391 aaKnown RBP21.16■□□□□ 0.98
HPS4-213ENST00000483631 MAPK13O15264 365 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 C4BPAP04003 597 aaKnown RBP21.16■□□□□ 0.98
HPS4-213ENST00000483631 RPN1P04843 607 aaKnown RBP21.16■□□□□ 0.98
HPS4-213ENST00000483631 CKMP06732 381 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 CNR2P34972 360 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 MTF1Q14872 753 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 NFIL3Q16649 462 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 TMEM196Q5HYL7 178 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 MDH1BQ5I0G3 518 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 WDR44Q5JSH3 913 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 TDRD10Q5VZ19 366 aaKnown RBP21.16■□□□□ 0.98
HPS4-213ENST00000483631 PLEKHO2Q8TD55 490 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 TMC2Q8TDI7 906 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 OSCP1Q8WVF1 389 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 HINFPQ9BQA5 517 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 TRPM5Q9NZQ8 1165 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 ARHGAP26Q9UNA1 814 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 SMG5Q9UPR3 1016 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms