RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 WDR44Q5JSH3 913 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 PAQR9Q6ZVX9 377 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 ACOT1Q86TX2 421 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 SCN4BQ8IWT1 228 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 WHAMMQ8TF30 809 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 TWNKQ96RR1 684 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.15■□□□□ 0.66
HDAC6-225ENST00000483506 TMEM30AQ9NV96 361 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 DACH1Q9UI36 760 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 ATP8B3O60423 1300 aa19.15■□□□□ 0.66
HDAC6-225ENST00000483506 F8VP50 259 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 TADA3O75528 432 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 DDX6P26196 483 aaKnown RBP eCLIP19.14■□□□□ 0.65
HDAC6-225ENST00000483506 GRIK1P39086 918 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 CACNA2D1P54289 1103 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 ARHGAP15Q53QZ3 475 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 STXBP5Q5T5C0 1151 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 TANGO2Q6ICL3 276 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 HFE2Q6ZVN8 426 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 FAM35AQ86V20 835 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 IRF2BP1Q8IU81 584 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 FUKQ8N0W3 1084 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 STKLD1Q8NE28 680 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 LMO3Q8TAP4 145 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 ZSCAN18Q8TBC5 510 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-225ENST00000483506 TATDN2Q93075 761 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 E2F7Q96AV8 911 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 SMARCD1Q96GM5 515 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 GCNAQ96QF7 691 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 KXD1Q9BQD3 176 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 TTLL2Q9BWV7 592 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 NT5C1AQ9BXI3 368 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 TASP1Q9H6P5 420 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 ZFP14Q9HCL3 533 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 WNT16Q9UBV4 365 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 ZDBF2Q9HCK1 2354 aa19.14■□□□□ 0.65
HDAC6-225ENST00000483506 ZNF638Q14966 1978 aaKnown RBP19.13■□□□□ 0.65
HDAC6-225ENST00000483506 ZNF318Q5VUA4 2279 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 CLDN5O00501 218 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 TRIM21P19474 475 aaKnown RBP19.13■□□□□ 0.65
HDAC6-225ENST00000483506 ANXA13P27216 316 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 DENND5BQ6ZUT9 1274 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 ST13P5Q8NFI4 369 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-225ENST00000483506 CNOT6LQ96LI5 555 aaKnown RBP19.13■□□□□ 0.65
HDAC6-225ENST00000483506 ARID3AQ99856 593 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 PLA2G2FQ9BZM2 168 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 CSNK1G1Q9HCP0 422 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 EHD2Q9NZN4 543 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC6-225ENST00000483506 PATJQ8NI35 1801 aa19.13■□□□□ 0.65
HDAC6-225ENST00000483506 ANAPC1Q9H1A4 1944 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 AFPP02771 609 aaKnown RBP19.12■□□□□ 0.65
HDAC6-225ENST00000483506 CYP4F8P98187 520 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 CETN1Q12798 172 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 KCNH2Q12809 1159 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 ORC1Q13415 861 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 CUL2Q13617 745 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 GPR158Q5T848 1215 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 UBR7Q8N806 425 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 DEPDC1BQ8WUY9 529 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 HNRNPABQ99729 332 aaKnown RBP19.12■□□□□ 0.65
HDAC6-225ENST00000483506 THAP9Q9H5L6 903 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 SLITRK6Q9H5Y7 841 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 CISHQ9NSE2 258 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 OBP2AQ9NY56 170 aa19.12■□□□□ 0.65
HDAC6-225ENST00000483506 MAGED2Q9UNF1 606 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-225ENST00000483506 NCANO14594 1321 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 CCDC130P13994 396 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 CD58P19256 250 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 TBXAS1P24557 533 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-225ENST00000483506 USP46P62068 366 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 GPC5P78333 572 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 MON1AQ86VX9 555 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 C12orf29Q8N999 325 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 SLC2A14Q8TDB8 520 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 PBXIP1Q96AQ6 731 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 SLC46A2Q9BY10 475 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 DNAI2Q9GZS0 605 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 DMAP1Q9NPF5 467 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-225ENST00000483506 KRT82Q9NSB4 513 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 IL37Q9NZH6 218 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 KIF26AQ9ULI4 1882 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-225ENST00000483506 COL4A2P08572 1712 aa19.11■□□□□ 0.65
HDAC6-225ENST00000483506 TNFRSF10BO14763 440 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 VIPR2P41587 438 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 YWHAEP62258 255 aaKnown RBP19.1■□□□□ 0.65
HDAC6-225ENST00000483506 PFKPQ01813 784 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 VITQ6UXI7 678 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 ARID3BQ8IVW6 561 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-225ENST00000483506 MFSD6LQ8IWD5 586 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 CMTM8Q8IZV2 173 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 FBXL6Q8N531 539 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 SLC4A11Q8NBS3 891 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 ZMIZ2Q8NF64 920 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 MRPS31Q92665 395 aaKnown RBP19.1■□□□□ 0.65
HDAC6-225ENST00000483506 RSPRY1Q96DX4 576 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 NT5C1BQ96P26 610 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 SMOQ99835 787 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 MED10Q9BTT4 135 aa19.1■□□□□ 0.65
HDAC6-225ENST00000483506 FAM49BQ9NUQ9 324 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms