RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 NRSN2Q9GZP1 204 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 TMEM60Q9H2L4 133 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 CBX8Q9HC52 389 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 LTB4R2Q9NPC1 389 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 OSGEPQ9NPF4 335 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 TOPORSQ9NS56 1045 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-207ENST00000483407 GDE1Q9NZC3 331 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 NCDNQ9UBB6 729 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 DNMT3BQ9UBC3 853 aaKnown RBP6.43□□□□□ -1.38
CSDE1-207ENST00000483407 PCDHGA2Q9Y5H1 932 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 BACE2Q9Y5Z0 518 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 CDY1Q9Y6F8 540 aa6.43□□□□□ -1.38
CSDE1-207ENST00000483407 ATRXP46100 2492 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 VPS13AQ96RL7 3174 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 H7C4K7 107 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 K7ERI5 159 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 PRRG1O14668 218 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF197O14709 1029 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 KRT37O76014 449 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 OR52Z1P0C646 297 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 PTPN2P17706 415 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 TKTP29401 623 aaKnown RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 CLCNKBP51801 687 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 CSTF1Q05048 431 aaKnown RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 PPP2R5DQ14738 602 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 NAB2Q15742 525 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ME3Q16798 604 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 UPP1Q16831 310 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 EEF1DP3Q658K8 133 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 IQCEQ6IPM2 695 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 TPRG1Q6ZUI0 275 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 REC114Q7Z4M0 266 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 MAML2Q8IZL2 1156 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ELMOD1Q8N336 334 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 DCLK2Q8N568 766 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 SUMF1Q8NBK3 374 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 NSUN7Q8NE18 718 aaKnown RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF461Q8TAF7 563 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 EDARADDQ8WWZ3 215 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ING5Q8WYH8 240 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 DNASE1L2Q92874 299 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ELSPBP1Q96BH3 223 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 MCRS1Q96EZ8 462 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 PPP1R10Q96QC0 940 aaKnown RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 KIFC3Q9BVG8 833 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 SRRTQ9BXP5 876 aaKnown RBP6.42□□□□□ -1.38
CSDE1-207ENST00000483407 CCDC113Q9H0I3 377 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 OSBPL2Q9H1P3 480 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ZFP14Q9HCL3 533 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 SLC38A7Q9NVC3 462 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 HCFC1R1Q9NWW0 138 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 ZSCAN32Q9NX65 697 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 DLL3Q9NYJ7 618 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 NUB1Q9Y5A7 615 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 DMDP11532 3685 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 PHLPP2Q6ZVD8 1323 aa6.42□□□□□ -1.38
CSDE1-207ENST00000483407 CFAP47Q6ZTR5 3102 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 WDR81Q562E7 1941 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 SMIM28A0A1B0GU29 152 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 MED19A0JLT2 244 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ARHGEF37A1IGU5 675 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CCDC169A6NNP5 214 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 I3L4J1 428 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 LINC01387J3KSC0 135 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 PODXLO00592 558 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 MAN2B1O00754 1011 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 TM4SF5O14894 197 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 SYN3O14994 580 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 KLF4O43474 513 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 TBC1D4O60343 1298 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 JAK2O60674 1132 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CYP11A1P05108 521 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ATF2P15336 505 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CD72P21854 359 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CCT6AP40227 531 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 BRCC3P46736 316 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 RPS9P46781 194 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 TRAPPC10P48553 1259 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ARL4DP49703 201 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF165P49910 485 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 NEK4P51957 841 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ARPP19P56211 112 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ROR1Q01973 937 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 GSTM4Q03013 218 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ADCY1Q08828 1119 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 DMP1Q13316 513 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 SERINC3Q13530 473 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF174Q15697 407 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 RSPO4Q2I0M5 234 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF568Q3ZCX4 644 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CYP4A22Q5TCH4 519 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 NT5DC1Q5TFE4 455 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 SLC8B1Q6J4K2 584 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CHSY3Q70JA7 882 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 PDZD4Q76G19 769 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 LEMD2Q8NC56 503 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 GALNT6Q8NCL4 622 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms