RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 DENND5BQ6ZUT9 1274 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 FAM35AQ86V20 835 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 FUKQ8N0W3 1084 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 PPM1KQ8N3J5 372 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 SHKBP1Q8TBC3 707 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 GPR152Q8TDT2 470 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 MCRS1Q96EZ8 462 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 TMEM176AQ96HP8 235 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 TWNKQ96RR1 684 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 HNRNPABQ99729 332 aaKnown RBP17.62■□□□□ 0.41
HMGN1-214ENST00000482733 ARID3AQ99856 593 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 INTS2Q9H0H0 1204 aaKnown RBP17.62■□□□□ 0.41
HMGN1-214ENST00000482733 ATXN3LQ9H3M9 355 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-214ENST00000482733 GCNT4Q9P109 453 aa17.62■□□□□ 0.41
HMGN1-214ENST00000482733 NCOR1O75376 2440 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 SOBPA7XYQ1 873 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 F8VP50 259 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 CLDN5O00501 218 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 TDGQ13569 410 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 HTR4Q13639 388 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 TEAD2Q15562 447 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 EXOC3L4Q17RC7 722 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 ZNF394Q53GI3 561 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 PAQR9Q6ZVX9 377 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 GAREM2Q75VX8 874 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 UBALD2Q8IYN6 164 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 C12orf29Q8N999 325 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 SLC2A14Q8TDB8 520 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 JAKMIP2Q96AA8 810 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 CYFIP2Q96F07 1278 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 HEXIM2Q96MH2 286 aaKnown RBP17.61■□□□□ 0.41
HMGN1-214ENST00000482733 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 IL21Q9HBE4 155 aa17.61■□□□□ 0.41
HMGN1-214ENST00000482733 DMAP1Q9NPF5 467 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-214ENST00000482733 MAGED2Q9UNF1 606 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-214ENST00000482733 AP1G2O75843 785 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 ASGR2P07307 311 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 TPM2P07951 284 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 FAM200BP0CF97 657 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 CCDC130P13994 396 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 DDX6P26196 483 aaKnown RBP eCLIP17.6■□□□□ 0.41
HMGN1-214ENST00000482733 RAD23BP54727 409 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 HSP90AA4PQ58FG1 418 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 SMYD5Q6GMV2 418 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 ENOSF1Q7L5Y1 443 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 UBR7Q8N806 425 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 SLC4A11Q8NBS3 891 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 ANKRD20A12PQ8NF67 263 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 EDAQ92838 391 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 KHSRPQ92945 711 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■□□□□ 8.8
HMGN1-214ENST00000482733 BPIFA3Q9BQP9 254 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 SLITRK6Q9H5Y7 841 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 KRT82Q9NSB4 513 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 FAM49BQ9NUQ9 324 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 COMMD8Q9NX08 183 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 KIAA1257Q9ULG3 409 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 CUL9Q8IWT3 2517 aa17.6■□□□□ 0.41
HMGN1-214ENST00000482733 ECI2O75521 394 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 RTN3O95197 1032 aaPredicted RBP17.59■□□□□ 0.41
HMGN1-214ENST00000482733 F11P03951 625 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 GJA1P17302 382 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 ZXDAP98168 799 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 ANO6Q4KMQ2 910 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 ARHGAP17Q68EM7 881 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 PARM1Q6UWI2 310 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 NUP93Q8N1F7 819 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 MRPS31Q92665 395 aaKnown RBP17.59■□□□□ 0.41
HMGN1-214ENST00000482733 SMARCD2Q92925 531 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 E2F7Q96AV8 911 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 ASB16Q96NS5 453 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 CRACR2AQ9BSW2 395 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 TTLL2Q9BWV7 592 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 TASP1Q9H6P5 420 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 FANCLQ9NW38 375 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 NUMBLQ9Y6R0 609 aa17.59■□□□□ 0.41
HMGN1-214ENST00000482733 PAEPP09466 180 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 ACO1P21399 889 aaKnown RBP17.58■□□□□ 0.4
HMGN1-214ENST00000482733 ADORA2BP29275 332 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 WEE1P30291 646 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 PPP3CCP48454 512 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 CACNA2D1P54289 1103 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 MFAP3P55082 362 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 FAM78AQ5JUQ0 283 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 MIIPQ5JXC2 388 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 GPR158Q5T848 1215 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 TMEM270Q6UE05 265 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 RRAGAQ7L523 313 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 ARHGEF19Q8IW93 802 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 SLC44A3Q8N4M1 653 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 ZSCAN18Q8TBC5 510 aaPredicted RBP17.58■□□□□ 0.4
HMGN1-214ENST00000482733 FGF14Q92915 247 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 ELSPBP1Q96BH3 223 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 KCNK16Q96T55 309 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.4
HMGN1-214ENST00000482733 TRPV4Q9HBA0 871 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms