RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 C2CD2LO14523 706 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 MAP3K13O43283 966 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 ZMPSTE24O75844 475 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 KRT37O76014 449 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 MTA2O94776 668 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 WNT7BP56706 349 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 KRT76Q01546 638 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 TAF5Q15542 800 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 FAM102AQ5T9C2 384 aaPredicted RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 LGSNQ5TDP6 509 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 PRAMEF18Q5VWM3 479 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 ZC3H7BQ9UGR2 993 aaKnown RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 FEM1BQ9UK73 627 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 PAPPAQ13219 1627 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 ZBED1O96006 694 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 CALB1P05937 261 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 JAK3P52333 1124 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 MOGSQ13724 837 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 NFIL3Q16649 462 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 WDR72Q3MJ13 1102 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 C16orf46Q6P387 395 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 NLRP4Q96MN2 994 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 FZD1Q9UP38 647 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
VPS52-218ENST00000482399 ACTL7BQ9Y614 415 aa13.29□□□□□ -0.28
VPS52-218ENST00000482399 ARAP2Q8WZ64 1704 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 GRIN3BO60391 1043 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 NR3C2P08235 984 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 POLR2BP30876 1174 aaKnown RBP13.28□□□□□ -0.28
VPS52-218ENST00000482399 RGS7P49802 495 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 GPX6P59796 221 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 SLC25A3Q00325 362 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 ASPHQ12797 758 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 ACVR2BQ13705 512 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
VPS52-218ENST00000482399 ZNF699Q32M78 642 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 POLNQ7Z5Q5 900 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 MCPH1Q8NEM0 835 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 UBA3Q8TBC4 463 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 SRPK1Q96SB4 655 aaKnown RBP13.28□□□□□ -0.28
VPS52-218ENST00000482399 SLC24A2Q9UI40 661 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 TOP3BO95985 862 aaKnown RBP13.28□□□□□ -0.28
VPS52-218ENST00000482399 ADRA2BP18089 450 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 AP2B1P63010 937 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 BTKQ06187 659 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 GRIK3Q13003 919 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 TRIP10Q15642 601 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 SCUBE1Q8IWY4 988 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 KIAA1551Q9HCM1 1747 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 ALOX15BO15296 676 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 EXTL3O43909 919 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 CST3P01034 146 aaPredicted RBP13.28□□□□□ -0.28
VPS52-218ENST00000482399 KLRC2P26717 231 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 IGBP1P78318 339 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 CDK16Q00536 496 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 ROR1Q01973 937 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 PEX6Q13608 980 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 EML3Q32P44 896 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 TNFAIP8L3Q5GJ75 292 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 JOSD2Q8TAC2 188 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 RNF217Q8TC41 542 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 CERKQ8TCT0 537 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 DEPDC1BQ8WUY9 529 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 SERAC1Q96JX3 654 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
VPS52-218ENST00000482399 PCDH9Q9HC56 1237 aa13.28□□□□□ -0.28
VPS52-218ENST00000482399 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.28□□□□□ -0.28
VPS52-218ENST00000482399 CCDC78A2IDD5 438 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 PSAPP07602 524 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 ASNSP08243 561 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 ATP6V1B1P15313 513 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 HOXA10P31260 410 aaPredicted RBP13.27□□□□□ -0.28
VPS52-218ENST00000482399 TNFSF9P41273 254 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 BST1Q10588 318 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 TCHHL1Q5QJ38 904 aaPredicted RBP13.27□□□□□ -0.28
VPS52-218ENST00000482399 SNRNP48Q6IEG0 339 aaKnown RBP13.27□□□□□ -0.28
VPS52-218ENST00000482399 CPT1BQ92523 772 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 NMD3Q96D46 503 aaKnown RBP13.27□□□□□ -0.28
VPS52-218ENST00000482399 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.28
VPS52-218ENST00000482399 CISHQ9NSE2 258 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 HERC5Q9UII4 1024 aaKnown RBP13.27□□□□□ -0.28
VPS52-218ENST00000482399 RABGEF1Q9UJ41 708 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 SHOC2Q9UQ13 582 aa13.27□□□□□ -0.28
VPS52-218ENST00000482399 PTPRJQ12913 1337 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 TMEM63AO94886 807 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms