RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SLC46A2Q9BY10 475 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 TMEM8AQ9HCN3 771 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 HEBP1Q9NRV9 189 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
HMGN1-213ENST00000482192 NCANO14594 1321 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 CHADO15335 359 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 SLC16A3O15427 465 aaKnown RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 GADD45BO75293 160 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 PRAMEF12O95522 483 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 AVPR1AP37288 418 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 ASPAP45381 313 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 MCCD1P59942 119 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 NOP14P78316 857 aaKnown RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 KRT39Q6A163 491 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 MON1AQ86VX9 555 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 CELF5Q8N6W0 485 aaKnown RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 MAB21L3Q8N8X9 362 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 DTWD2Q8NBA8 298 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 ELMO3Q96BJ8 720 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 DHTKD1Q96HY7 919 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 C8orf48Q96LL4 319 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 NELL2Q99435 816 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 OSBPL6Q9BZF3 934 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 FOXQ1Q9C009 403 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 SDCBP2Q9H190 292 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 MMRN2Q9H8L6 949 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
HMGN1-213ENST00000482192 MRPS17Q9Y2R5 130 aaKnown RBP12.66□□□□□ -0.38
HMGN1-213ENST00000482192 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 F8VP50 259 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 H0Y858 1186 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 ARNTLO00327 626 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 MAN2B1O00754 1011 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
HMGN1-213ENST00000482192 MXI1P50539 228 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
HMGN1-213ENST00000482192 UBE2HP62256 183 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 UBXN2BQ14CS0 331 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 ARHGAP29Q52LW3 1261 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 TXNDC8Q6A555 127 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
HMGN1-213ENST00000482192 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 CSGALNACT1Q8TDX6 532 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 ZNF518BQ9C0D4 1074 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 NIF3L1Q9GZT8 377 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
HMGN1-213ENST00000482192 KIF9Q9HAQ2 790 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 LTB4R2Q9NPC1 389 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 THG1LQ9NWX6 298 aaKnown RBP12.65□□□□□ -0.38
HMGN1-213ENST00000482192 PIAS3Q9Y6X2 628 aa12.65□□□□□ -0.38
HMGN1-213ENST00000482192 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 FAM170BA6NMN3 283 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 TADA3O75528 432 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 DCNP07585 359 aaKnown RBP12.64□□□□□ -0.39
HMGN1-213ENST00000482192 GLULP15104 373 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 CD72P21854 359 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 CCNE1P24864 410 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 PPP3CCP48454 512 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 NDST1P52848 882 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-213ENST00000482192 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-213ENST00000482192 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 C1orf228Q6PIY5 440 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 FBXL13Q8NEE6 735 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 ATOH1Q92858 354 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-213ENST00000482192 USP13Q92995 863 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-213ENST00000482192 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 MED10Q9BTT4 135 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 DNAI2Q9GZS0 605 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 DLGAP2Q9P1A6 1054 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 COL4A3Q01955 1670 aa12.64□□□□□ -0.39
HMGN1-213ENST00000482192 NUP210Q8TEM1 1887 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 COL4A2P08572 1712 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 TRAV19A0A0A6YYK7 116 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CLDN5O00501 218 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 NCAM2O15394 837 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CKMP06732 381 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 MAGEA9P43362 315 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms