RNA–Protein interactions for RNA: ENST00000481161.5

GCA-209, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-209ENST00000481161 MSRAQ9UJ68 235 aa11.33□□□□□ -0.6
GCA-209ENST00000481161 PACSIN2Q9UNF0 486 aaPredicted RBP11.33□□□□□ -0.6
GCA-209ENST00000481161 TET1Q8NFU7 2136 aa11.33□□□□□ -0.6
GCA-209ENST00000481161 SCN5AQ14524 2016 aa11.33□□□□□ -0.6
GCA-209ENST00000481161 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 GABRDO14764 452 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 ZNF185O15231 689 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 CEP104O60308 925 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 PROSCO94903 275 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
GCA-209ENST00000481161 CTNNA2P26232 953 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 CXCR5P32302 372 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 MAN1A1P33908 653 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 ACADSBP45954 432 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 GABRB2P47870 512 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 DNA2P51530 1060 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 BCAT1P54687 386 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 CCL23P55773 120 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
GCA-209ENST00000481161 ITIH3Q06033 890 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 BST2Q10589 180 aaKnown RBP11.32□□□□□ -0.6
GCA-209ENST00000481161 PDCLQ13371 301 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 RAB30Q15771 203 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 TMEM240Q5SV17 173 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 TEX35Q5T0J7 233 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 WSCD1Q658N2 575 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 ZNF572Q7Z3I7 529 aaPredicted RBP11.32□□□□□ -0.6
GCA-209ENST00000481161 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 ANKRD52Q8NB46 1076 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 B3GALNT2Q8NCR0 500 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 COG1Q8WTW3 980 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 LRFN3Q9BTN0 628 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 CARD9Q9H257 536 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 GOLPH3Q9H4A6 298 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 SLC28A3Q9HAS3 691 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 FAM49BQ9NUQ9 324 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 CHORDC1Q9UHD1 332 aaPredicted RBP11.32□□□□□ -0.6
GCA-209ENST00000481161 CDH9Q9ULB4 789 aa11.32□□□□□ -0.6
GCA-209ENST00000481161 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
GCA-209ENST00000481161 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 SIGLEC16A6NMB1 481 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 TMEM189-UBE2V1I3L0A0 370 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 PGRMC1O00264 195 aaKnown RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 DDX3YO15523 660 aaKnown RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 TRAPPC3O43617 180 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 CYP11A1P05108 521 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 KRT3P12035 628 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 DESP17661 470 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 LMO2P25791 158 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 PIGHQ14442 188 aaPredicted RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 GPNMBQ14956 572 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 CLLU1OSQ5K130 101 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 SEL1L2Q5TEA6 688 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 CNKSR3Q6P9H4 555 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 C16orf59Q7L2K0 433 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 OSTM1Q86WC4 334 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 ZDHHC17Q8IUH5 632 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 NPAS4Q8IUM7 802 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 THEM5Q8N1Q8 247 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 TMEM199Q8N511 208 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 ACTRT1Q8TDG2 376 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 SCLYQ96I15 445 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 BTBD6Q96KE9 485 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 SUSD3Q96L08 255 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 CPXM1Q96SM3 734 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 MRPL9Q9BYD2 267 aaKnown RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
GCA-209ENST00000481161 TBX21Q9UL17 535 aa11.31□□□□□ -0.6
GCA-209ENST00000481161 TCRBV5S1A1TA0A578 114 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 GOLGA8SH3BPF8 625 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 M0QZQ0 153 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 TUBBP07437 444 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 CSF2RAP15509 400 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 TYMPP19971 482 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 ADORA2BP29275 332 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 CYP2C18P33260 490 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 CTNNA1P35221 906 aaKnown RBP11.3□□□□□ -0.6
GCA-209ENST00000481161 CETN2P41208 172 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 OR1G1P47890 313 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 RWDD2BP57060 319 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 DSC1Q08554 894 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 IKBKEQ14164 716 aa11.3□□□□□ -0.6
GCA-209ENST00000481161 MAPRE1Q15691 268 aaKnown RBP11.3□□□□□ -0.6
GCA-209ENST00000481161 PTPROQ16827 1216 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms