RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SLC15A3Q8IY34 581 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 ATRIPQ8WXE1 791 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 CCDC136Q96JN2 1154 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 MSLNLQ96KJ4 702 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 DUSP26Q9BV47 211 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 SARGQ9BW04 601 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 NUP62CLQ9H1M0 184 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 PRDM13Q9H4Q3 707 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 GEMIN8Q9NWZ8 242 aaKnown RBP6.36□□□□□ -1.39
CALD1-219ENST00000480638 ZSCAN32Q9NX65 697 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 TBC1D30Q9Y2I9 924 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 INSL6Q9Y581 213 aa6.36□□□□□ -1.39
CALD1-219ENST00000480638 TLR5O60602 858 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 NXPH3O95157 252 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 NUDT3O95989 172 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 ZFXP17010 805 aaPredicted RBP6.35□□□□□ -1.39
CALD1-219ENST00000480638 RPL17P18621 184 aaKnown RBP6.35□□□□□ -1.39
CALD1-219ENST00000480638 PDE6CP51160 858 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 BMPR2Q13873 1038 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 SMN1Q16637 294 aaKnown RBP6.35□□□□□ -1.39
CALD1-219ENST00000480638 BPIFB1Q8TDL5 484 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 ZG16BQ96DA0 208 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 RIOX1Q9H6W3 641 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 FAM50BQ9Y247 325 aa6.35□□□□□ -1.39
CALD1-219ENST00000480638 SLC16A3O15427 465 aaKnown RBP6.34□□□□□ -1.39
CALD1-219ENST00000480638 PQBP1O60828 265 aaKnown RBP6.34□□□□□ -1.39
CALD1-219ENST00000480638 ERBB2P04626 1255 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 TRIM27P14373 513 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 IL1R1P14778 569 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
CALD1-219ENST00000480638 HLTFQ14527 1009 aaKnown RBP eCLIP6.34□□□□□ -1.39
CALD1-219ENST00000480638 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.39
CALD1-219ENST00000480638 STRIP1Q5VSL9 837 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 GRASPQ7Z6J2 395 aaPredicted RBP6.34□□□□□ -1.39
CALD1-219ENST00000480638 PHKBQ93100 1093 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 PPP1R9BQ96SB3 815 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 STK31Q9BXU1 1019 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 GLOD4Q9HC38 313 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 XPNPEP3Q9NQH7 507 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 SLC17A6Q9P2U8 582 aa6.34□□□□□ -1.39
CALD1-219ENST00000480638 CCP110O43303 1012 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 RASSF9O75901 435 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 TTLL1O95922 423 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 ADORA2AP29274 412 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 LIPAP38571 399 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 PTH2RP49190 550 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 PRKAG1P54619 331 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 SAFBQ15424 915 aaKnown RBP eCLIP6.33□□□□□ -1.4
CALD1-219ENST00000480638 COBLL1Q53SF7 1204 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 PLAC9Q5JTB6 97 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 TREML2Q5T2D2 321 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 DEPDC1Q5TB30 811 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 ZNF551Q7Z340 670 aaPredicted RBP6.33□□□□□ -1.4
CALD1-219ENST00000480638 CCAR1Q8IX12 1150 aaKnown RBP6.33□□□□□ -1.4
CALD1-219ENST00000480638 GLG1Q92896 1179 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 KLK15Q9H2R5 256 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 CORO2BQ9UQ03 480 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 ENTPD2Q9Y5L3 495 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 SNX13Q9Y5W8 968 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 CDY1Q9Y6F8 540 aa6.33□□□□□ -1.4
CALD1-219ENST00000480638 LOC102723971A0A1B0GUV8 181 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 RHPN2P1A8MT19 583 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 F8W8V4 182 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 GCOM1H8Y6P7 765 aaPredicted RBP6.32□□□□□ -1.4
CALD1-219ENST00000480638 IL6RP08887 468 aaPredicted RBP6.32□□□□□ -1.4
CALD1-219ENST00000480638 EBLN1P0CF75 366 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 TXNP10599 105 aaKnown RBP6.32□□□□□ -1.4
CALD1-219ENST00000480638 SLC5A1P13866 664 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 JUPP14923 745 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 INSCQ1MX18 579 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 OSCP1Q8WVF1 389 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 UROC1Q96N76 676 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 UNKQ9C0B0 810 aaKnown RBP6.32□□□□□ -1.4
CALD1-219ENST00000480638 R3HDMLQ9H3Y0 253 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 ARHGEF3Q9NR81 526 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 IL17RBQ9NRM6 502 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 SERTAD4Q9NUC0 356 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 DNMT3BQ9UBC3 853 aaKnown RBP6.32□□□□□ -1.4
CALD1-219ENST00000480638 RGS17Q9UGC6 210 aaPredicted RBP6.32□□□□□ -1.4
CALD1-219ENST00000480638 MID2Q9UJV3 735 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 HDAC9Q9UKV0 1011 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 ST3GAL5Q9UNP4 418 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 SH2B3Q9UQQ2 575 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 SNX14Q9Y5W7 946 aa6.32□□□□□ -1.4
CALD1-219ENST00000480638 A1L4Q6 167 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 H7C4K7 107 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 FOXN3O00409 490 aaPredicted RBP6.31□□□□□ -1.4
CALD1-219ENST00000480638 APAF1O14727 1248 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 SUV39H1O43463 412 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 PRC1O43663 620 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 ONECUT2O95948 504 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 FESP07332 822 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 HMGB1P09429 215 aaKnown RBP6.31□□□□□ -1.4
CALD1-219ENST00000480638 ACVR2AP27037 513 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 PIK3CBP42338 1070 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 TBX4P57082 545 aa6.31□□□□□ -1.4
CALD1-219ENST00000480638 PTCHD3Q3KNS1 767 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms