RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 MARCOQ9UEW3 520 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 KIAA1257Q9ULG3 409 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ZNRF3Q9ULT6 936 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ZMYND8Q9ULU4 1186 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ZNF543Q08ER8 600 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ERAP2Q6P179 960 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 PRMT9Q6P2P2 845 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 THTPAQ9BU02 230 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 COPS7BQ9H9Q2 264 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ANKEF1Q9NU02 776 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 RHOBTB1O94844 696 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 RARBP10826 455 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 VHLP40337 213 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ACTN3Q08043 901 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SYCP2LQ5T4T6 812 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 IKBIPQ70UQ0 350 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CHSY1Q86X52 802 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 HS6ST3Q8IZP7 471 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CHST13Q8NET6 341 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 PLA2G12BQ9BX93 195 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 FANCEQ9HB96 536 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 HBP1O60381 514 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 C11orf88Q6PI97 169 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 E2F7Q96AV8 911 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 AGAP1Q9UPQ3 857 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 SRGNP10124 158 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 GEMIN4P57678 1058 aaKnown RBP9.9□□□□□ -0.83
VEGFA-212ENST00000480614 BFSP2Q13515 415 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 MTMR2Q13614 643 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.9□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF839A8K0R7 811 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 CHI3L1P36222 383 aaPredicted RBP9.9□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF177Q13360 481 aaPredicted RBP9.9□□□□□ -0.83
VEGFA-212ENST00000480614 ITIH4Q14624 930 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 MAP3K14Q99558 947 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 LNPEPQ9UIQ6 1025 aa9.9□□□□□ -0.83
VEGFA-212ENST00000480614 LSP1P33241 339 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SREBF2Q12772 1141 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ZRANB3Q5FWF4 1079 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 STRIP1Q5VSL9 837 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 IFNEQ86WN2 208 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 C21orf2O43822 256 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SERPINB3P29508 390 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 CCT8P50990 548 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ITGA9Q13797 1035 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF280CQ8ND82 737 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 OXER1Q8TDS5 423 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM117Q9H0C3 514 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 DLGAP3O95886 979 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 KPNA1P52294 538 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PDK2Q15119 407 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 KYNUQ16719 465 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ANKRD49Q8WVL7 239 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 FAM210AQ96ND0 272 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SIKE1Q9BRV8 207 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 UBXN6Q9BZV1 441 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TRIM24O15164 1050 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 FBXO21O94952 628 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SLC25A27O95847 323 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 WEE2P0C1S8 567 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TKTP29401 623 aaKnown RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 CACNB3P54284 484 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 CACNB2Q08289 660 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PLD1Q13393 1074 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 GOLGA7BQ2TAP0 167 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 FAM45BPQ6NSW5 357 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM143Q96AN5 459 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 RAD54BQ9Y620 910 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM191CA6NGB0 347 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 NMT2O60551 498 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PREPLQ4J6C6 727 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 CENPLQ8N0S6 344 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF473Q8WTR7 871 aaKnown RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 RPS6KB2Q9UBS0 482 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PSMC6P62333 389 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 NFIAQ12857 509 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PCSK7Q16549 785 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.835e-7■□□□□ 8.4
VEGFA-212ENST00000480614 JAMLQ86YT9 394 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 KLHL31Q9H511 634 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 WDR41Q9HAD4 459 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ALG13Q9NP73 1137 aaKnown RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 AHSPQ9NZD4 102 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 STAG3L1P0CL83 205 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 MMP14P50281 582 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 DCAF6Q58WW2 860 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PSMD14O00487 310 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 STIP1P31948 543 aaKnown RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SLC16A1P53985 500 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM260Q9NX78 707 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SLC39A10Q9ULF5 831 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms