RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 CDV3Q9UKY7 258 aaKnown RBP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 CDH9Q9ULB4 789 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 TRAV19A0A0A6YYK7 116 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 TRDMT1O14717 391 aaKnown RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 YEATS4O95619 227 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 EGFP01133 1207 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 CKMP06732 381 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 USP17L7P0C7H9 530 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 WARSP23381 471 aaKnown RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 BDNFP23560 247 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 CNR2P34972 360 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 MAGEA11P43364 429 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 PXNP49023 591 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 CYP2J2P51589 502 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 FAM160A1Q05DH4 1040 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 PDGFRLQ15198 375 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 C4orf50Q6ZRC1 276 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 CEP68Q76N32 757 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 WDR5BQ86VZ2 330 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 CCDC127Q96BQ5 260 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 C7orf25Q9BPX7 421 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 MRPL45Q9BRJ2 306 aaKnown RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 BLZF1Q9H2G9 400 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 KIAA1586Q9HCI6 787 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 POLR3BQ9NW08 1133 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 WNT6Q9Y6F9 365 aa20.15■□□□□ 0.82
ABCF3-214ENST00000480562 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.15■□□□□ 0.82
ABCF3-214ENST00000480562 ATG2BQ96BY7 2078 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 C2orf78A6NCI8 922 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 POLR2DO15514 142 aaKnown RBP20.14■□□□□ 0.81
ABCF3-214ENST00000480562 CST3P01034 146 aaPredicted RBP20.14■□□□□ 0.81
ABCF3-214ENST00000480562 TNNI1P19237 187 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 SDHBP21912 280 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 HOXA6P31267 233 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 GRIK1P39086 918 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 GALK1P51570 392 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 CYP27A1Q02318 531 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 ZNF77Q15935 545 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 ARL14EPQ8N8R7 260 aaPredicted RBP20.14■□□□□ 0.81
ABCF3-214ENST00000480562 SCFD1Q8WVM8 642 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 DUS2Q9NX74 493 aaKnown RBP20.14■□□□□ 0.81
ABCF3-214ENST00000480562 GCNT4Q9P109 453 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 NME7Q9Y5B8 376 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 SPTBN2O15020 2390 aa20.14■□□□□ 0.81
ABCF3-214ENST00000480562 DCDC2BA2VCK2 349 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 RNF40O75150 1001 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 GJA4P35212 333 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 USP46P62068 366 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 AMPD2Q01433 879 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 CYP24A1Q07973 514 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 UNC13DQ70J99 1090 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 CPA6Q8N4T0 437 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 FAM160A2Q8N612 972 aaPredicted RBP20.13■□□□□ 0.81
ABCF3-214ENST00000480562 FSIP1Q8NA03 581 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 OSCP1Q8WVF1 389 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 FNBP1Q96RU3 617 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 CGRRF1Q99675 332 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 ECT2Q9H8V3 914 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 SEMA4GQ9NTN9 838 aa20.13■□□□□ 0.81
ABCF3-214ENST00000480562 HDCP19113 662 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 GNL1P36915 607 aaPredicted RBP20.12■□□□□ 0.81
ABCF3-214ENST00000480562 IFNAR2P48551 515 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 EHHADHQ08426 723 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 USP4Q13107 963 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 KCNB1Q14721 858 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 PSMD6Q15008 389 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 MAPRE1Q15691 268 aaKnown RBP20.12■□□□□ 0.81
ABCF3-214ENST00000480562 MDH1BQ5I0G3 518 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 VSTM1Q6UX27 236 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 XXYLT1Q8NBI6 393 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 MYCBPAPQ8TBZ2 947 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 SH3RF2Q8TEC5 729 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 PCED1BQ96HM7 432 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 SPATA17Q96L03 361 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 P2RY13Q9BPV8 354 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 SNX25Q9H3E2 840 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 SLC39A2Q9NP94 309 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 SLC8A2Q9UPR5 921 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 ANAPC1Q9H1A4 1944 aa20.12■□□□□ 0.81
ABCF3-214ENST00000480562 UBE4BO95155 1302 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 ATG13O75143 517 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 DRD1P21728 446 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 ANXA13P27216 316 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 AFMP43652 599 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 CUL4BQ13620 913 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 EML3Q32P44 896 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 DENND5BQ6ZUT9 1274 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 HS2ST1Q7LGA3 356 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 OR6B3Q8NGW1 331 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 ZNF516Q92618 1163 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 SNX21Q969T3 373 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 GZF1Q9H116 711 aaPredicted RBP20.11■□□□□ 0.81
ABCF3-214ENST00000480562 LINC00597Q9H2U6 94 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 PCDHA7Q9UN72 937 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 GREB1Q4ZG55 1949 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 SDK1Q7Z5N4 2213 aa20.11■□□□□ 0.81
ABCF3-214ENST00000480562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms