RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 TDP1Q9NUW8 608 aa16.36■□□□□ 0.21
CDK9-203ENST00000480353 DLGAP2Q9P1A6 1054 aa16.36■□□□□ 0.21
CDK9-203ENST00000480353 TRAF3IP3Q9Y228 551 aa16.36■□□□□ 0.21
CDK9-203ENST00000480353 KIF26AQ9ULI4 1882 aaPredicted RBP16.35■□□□□ 0.21
CDK9-203ENST00000480353 PTPRDP23468 1912 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 TRAV19A0A0A6YYK7 116 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 SOBPA7XYQ1 873 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 CKMP06732 381 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 VAMP7P51809 220 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 IFRD2Q12894 506 aaPredicted RBP16.35■□□□□ 0.21
CDK9-203ENST00000480353 ADAM9Q13443 819 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 LRRC32Q14392 662 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 CCDC142Q17RM4 750 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 DENND5BQ6ZUT9 1274 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 INTS8Q75QN2 995 aaKnown RBP16.35■□□□□ 0.21
CDK9-203ENST00000480353 LIMS2Q7Z4I7 341 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 MON1AQ86VX9 555 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 FAM186BQ8IYM0 893 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
CDK9-203ENST00000480353 B3GALNT2Q8NCR0 500 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 RSPRY1Q96DX4 576 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 PCED1BQ96HM7 432 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 CEP295NLQ96MC4 621 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 TSG101Q99816 390 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 SMYD3Q9H7B4 428 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
CDK9-203ENST00000480353 PROB1E7EW31 1015 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 IKBKBO14920 756 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 ABL1P00519 1130 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 C4BPAP04003 597 aaKnown RBP16.34■□□□□ 0.21
CDK9-203ENST00000480353 PSMC2P35998 433 aaKnown RBP16.34■□□□□ 0.21
CDK9-203ENST00000480353 RPS9P46781 194 aaKnown RBP16.34■□□□□ 0.21
CDK9-203ENST00000480353 DLG4P78352 724 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 CSTF1Q05048 431 aaKnown RBP16.34■□□□□ 0.21
CDK9-203ENST00000480353 PNOCQ13519 176 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 PLEKHO2Q8TD55 490 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 TMEM174Q8WUU8 243 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 TAF4BQ92750 862 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 SPATA17Q96L03 361 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 LMAN1LQ9HAT1 526 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 TRPM5Q9NZQ8 1165 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 GREB1Q4ZG55 1949 aa16.34■□□□□ 0.21
CDK9-203ENST00000480353 F8VP50 259 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 MAPK13O15264 365 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 SP9P0CG40 484 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 EPB41P11171 864 aaKnown RBP16.33■□□□□ 0.2
CDK9-203ENST00000480353 RAP1GAPP47736 663 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 MLLT6P55198 1093 aaPredicted RBP16.33■□□□□ 0.2
CDK9-203ENST00000480353 CDH8P55286 799 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 CLDN10P78369 228 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 AMPD2Q01433 879 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 STIM1Q13586 685 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 NFIL3Q16649 462 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 ITPRIPL2Q3MIP1 535 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 ZACNQ401N2 412 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 TMEM150AQ86TG1 271 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 RALGPS2Q86X27 583 aaPredicted RBP16.33■□□□□ 0.2
CDK9-203ENST00000480353 SMARCE1Q969G3 411 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 EXOC4Q96A65 974 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 CLDN23Q96B33 292 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 MYRFLQ96LU7 910 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 SLITRK1Q96PX8 696 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 HINFPQ9BQA5 517 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
CDK9-203ENST00000480353 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 VRTNQ9H8Y1 702 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 GKN1Q9NS71 199 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 GTSE1Q9NYZ3 720 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 FBXO4Q9UKT5 387 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 R4GN57 208 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 NCANO14594 1321 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 COL4A2P08572 1712 aa16.33■□□□□ 0.2
CDK9-203ENST00000480353 SPECC1L-ADORA2AF8WAN1 911 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 CETN3O15182 167 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 STX10O60499 249 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 SOX9P48436 509 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 PPP3CCP48454 512 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 IFNAR2P48551 515 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 SV2AQ7L0J3 742 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 SMYD4Q8IYR2 804 aaPredicted RBP16.32■□□□□ 0.2
CDK9-203ENST00000480353 FMR1NBQ8N0W7 255 aaPredicted RBP16.32■□□□□ 0.2
CDK9-203ENST00000480353 ATRIPQ8WXE1 791 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 USP13Q92995 863 aaPredicted RBP16.32■□□□□ 0.2
CDK9-203ENST00000480353 C8orf48Q96LL4 319 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 IER2Q9BTL4 223 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 GZF1Q9H116 711 aaPredicted RBP16.32■□□□□ 0.2
CDK9-203ENST00000480353 ANAPC1Q9H1A4 1944 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.32■□□□□ 0.21e-32■■■■■ 782.6
CDK9-203ENST00000480353 CCL26Q9Y258 94 aa16.32■□□□□ 0.2
CDK9-203ENST00000480353 CACNA1HO95180 2353 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 HELZP42694 1942 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms