RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 TXLNBQ8N3L3 684 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 C1orf131Q8NDD1 294 aaKnown RBP17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 SMARCD1Q96GM5 515 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 HSFY1Q96LI6 401 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 SLC4A5Q9BY07 1137 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 PDCL3Q9H2J4 239 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 PNPLA8Q9NP80 782 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 MAFFQ9ULX9 164 aa17.82■□□□□ 0.44
SCAMP3-207ENST00000480219 RCCD1A6NED2 376 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 H3BNC9 293 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 FSCN2O14926 492 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 CCP110O43303 1012 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 ZSCAN12O43309 604 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 ABLIM3O94929 683 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 VNN2O95498 520 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 FAM200BP0CF97 657 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 MYBL1P10243 752 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 PBX2P40425 430 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 NSFP46459 744 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 GALCP54803 685 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 ROR1Q01973 937 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 PDE4CQ08493 712 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 PDCLQ13371 301 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 RAB33AQ14088 237 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 SLC39A12Q504Y0 691 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 TPGS2Q68CL5 300 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 VSTM1Q6UX27 236 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 CLEC20AQ6ZU45 233 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 SPRED2Q7Z698 418 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 TMEM110Q86TL2 294 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 MCOLN2Q8IZK6 566 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 ZMIZ2Q8NF64 920 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 SPPL2BQ8TCT7 592 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 KCTD13Q8WZ19 329 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 SECISBP2LQ93073 1101 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 TRIM11Q96F44 468 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 AVENQ9NQS1 362 aaPredicted RBP17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 MRPL17Q9NRX2 175 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 TMEM30AQ9NV96 361 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 SEPT11Q9NVA2 429 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 MSRAQ9UJ68 235 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 CDY1Q9Y6F8 540 aa17.81■□□□□ 0.44
SCAMP3-207ENST00000480219 NCANO14594 1321 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 PDE4DIPQ5VU43 2346 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 A0A0A6YYK5 440 aaPredicted RBP17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 WDR27A2RRH5 827 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 MTMR11A4FU01 709 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 CLDN5O00501 218 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 ADAM12O43184 909 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 OR4Q2P0C623 313 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 ADORA2BP29275 332 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 ARHGAP25P42331 645 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 CAMK1Q14012 370 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 PTPN20Q4JDL3 420 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 PDE12Q6L8Q7 609 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 UBA3Q8TBC4 463 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 CPA5Q8WXQ8 436 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 CEP295NLQ96MC4 621 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 NOX5Q96PH1 765 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 SMOQ99835 787 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 PACSIN1Q9BY11 444 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 NGRNQ9NPE2 291 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 AFF4Q9UHB7 1163 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 PCDHB5Q9Y5E4 795 aa17.8■□□□□ 0.44
SCAMP3-207ENST00000480219 PATJQ8NI35 1801 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 TCRBV5S1A1TA0A578 114 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 GOLGA6L9A6NEM1 432 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 HHLA1C9JL84 531 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 CYP1A2P05177 515 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 CALB1P05937 261 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 DNAJB1P25685 340 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 OR1D2P34982 312 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 NDUFV1P49821 464 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 CACNA2D1P54289 1103 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 HADHBP55084 474 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 RAB41Q5JT25 222 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 PMF1Q6P1K2 205 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 ERICH1Q86X53 443 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 SPATA2LQ8IUW3 424 aaPredicted RBP17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 MSANTD4Q8NCY6 345 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 ZNF461Q8TAF7 563 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 PPP1R13BQ96KQ4 1090 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 C8orf48Q96LL4 319 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 CPXM1Q96SM3 734 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 TSGA10Q9BZW7 698 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 LACRTQ9GZZ8 138 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 MIS12Q9H081 205 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 LMAN2LQ9H0V9 348 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 DMAP1Q9NPF5 467 aaPredicted RBP17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 KRT82Q9NSB4 513 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
SCAMP3-207ENST00000480219 TULP2O00295 520 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 AP1G2O75843 785 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 GABBR2O75899 941 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 BEST1O76090 585 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 MTA2O94776 668 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms