RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CYP1A1P04798 512 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM200BP0CF97 657 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 RPS6KA3P51812 740 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KIF22Q14807 665 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 LACTB2Q53H82 288 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KIF2BQ8N4N8 673 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SEPT8Q92599 483 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TRMOQ9BU70 441 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ADNPQ9H2P0 1102 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM124BQ9H5Z6 455 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TASP1Q9H6P5 420 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CYP39A1Q9NYL5 469 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 POLG2Q9UHN1 485 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 NAALADL1Q9UQQ1 740 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TPRKBQ9Y3C4 175 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 FARP1Q9Y4F1 1045 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TNS3Q68CZ2 1445 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KCNN4O15554 427 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CPA3P15088 417 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ATICP31939 592 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 GUCY1A2P33402 732 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CRKP46108 304 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CCDC15Q0P6D6 951 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PPIL2Q13356 520 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TAB1Q15750 504 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 FNIP1Q8TF40 1166 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF669Q96BR6 464 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 DCPSQ96C86 337 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PGBD4Q96DM1 585 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 MRPL48Q96GC5 212 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 APOPT1Q96IL0 206 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM117Q9H0C3 514 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 RAD21L1Q9H4I0 556 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 METTL5Q9NRN9 209 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PCDHA3Q9Y5H8 950 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 LRRC7Q96NW7 1537 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SALL1Q9NSC2 1324 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TCP10L2B9ZVM9 353 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 RIPK2O43353 540 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 RARBP10826 455 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 YWHABP31946 246 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ARMCX4Q5H9R4 360 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 STRIP1Q5VSL9 837 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KIAA1841Q6NSI8 718 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 IZUMO2Q6UXV1 221 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 MARK2Q7KZI7 788 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 LRRC49Q8IUZ0 686 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SPATA20Q8TB22 786 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PHF21AQ96BD5 680 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 MTMR8Q96EF0 704 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 EGFL8Q99944 293 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SMARCAD1Q9H4L7 1026 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 TCF7L2Q9NQB0 619 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 GJA3Q9Y6H8 435 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SYNJ2BP-COX16A0A087WUM0 186 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 HEATR9A2RTY3 570 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 BCL10O95999 233 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 NDUFB10O96000 172 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PRKCBP05771 671 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 MSH3P20585 1137 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 S100A1P23297 94 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ACAT1P24752 427 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PON1P27169 355 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SREBF1P36956 1147 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KCNJ1P48048 391 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 MAD2L1Q13257 205 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CHI3L2Q15782 390 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 NDUFA5Q16718 116 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ATAD3BQ5T9A4 648 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 BTBD8Q5XKL5 378 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ARHGEF19Q8IW93 802 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ACTL9Q8TC94 416 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 NDEL1Q9GZM8 345 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SEMA4AQ9H3S1 761 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PLGRKTQ9HBL7 147 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SSU72Q9NP77 194 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 COX16Q9P0S2 106 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ADAM30Q9UKF2 790 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PRPF19Q9UMS4 504 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ABCC3O15438 1527 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM205AQ6ZU69 1335 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 LOC100653049A0A140TA62 436 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 FOXN3O00409 490 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT34O76011 436 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ERBB2P04626 1255 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CCDC130P13994 396 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 AKR1B1P15121 316 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SOX6P35712 828 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PIK3CGP48736 1102 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SCARF1Q14162 830 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC15A2Q16348 729 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 CDO1Q16878 200 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 DDIASQ8IXT1 998 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 SH3RF3Q8TEJ3 882 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 PLEKHA8Q96JA3 519 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 MXRA8Q9BRK3 442 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 RIOX1Q9H6W3 641 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms