RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PLA2G4AP47712 749 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 RPL34P49207 117 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CLCN4P51793 760 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 NOMO3P69849 1222 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CENPCQ03188 943 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF697Q5TEC3 545 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 TAF3Q5VWG9 929 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 STK32AQ8WU08 396 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 HDAC7Q8WUI4 952 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CHP1Q99653 195 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 UBXN6Q9BZV1 441 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 NHEJ1Q9H9Q4 299 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 DMAP1Q9NPF5 467 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CYLDQ9NQC7 956 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CEP83Q9Y592 693 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 PCDHGC5Q9Y5F6 944 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 MYO16Q9Y6X6 1858 aa13.27□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF638Q14966 1978 aaKnown RBP13.27□□□□□ -0.28
TRAPPC12-218ENST00000479897 CLDN5O00501 218 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 DDX3XO00571 662 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 XPO1O14980 1071 aaKnown RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 TRIM66O15016 1216 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 ARHGAP6O43182 974 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 TGM5O43548 720 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 NRDCO43847 1150 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CLASP2O75122 1294 aaKnown RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 AP1G2O75843 785 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 LCA5LO95447 670 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 GLUD1P00367 558 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CFHP08603 1231 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 UNGP13051 313 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 TNFAIP3P21580 790 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 KIF11P52732 1056 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 ARPP19P56211 112 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 SLC8A3P57103 927 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CCZ1BP86790 482 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CCZ1P86791 482 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 SLC18A3Q16572 532 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 PALB2Q86YC2 1186 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 GLYCTKQ8IVS8 523 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 TMEM35BQ8NCS4 154 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 MICAL1Q8TDZ2 1067 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 SLC35F5Q8WV83 523 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CCDC42Q96M95 316 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 PCDHB18PQ96TA0 734 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 SMOQ99835 787 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 MED10Q9BTT4 135 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 CRISPLD1Q9H336 500 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 TMEM30AQ9NV96 361 aa13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 ABI2Q9NYB9 513 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-218ENST00000479897 A0A087X0T9 212 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 NCANO14594 1321 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PAPLNO95428 1278 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 POU2F2P09086 479 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 FAM228BP0C875 321 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 BDNFP23560 247 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 CYP2F1P24903 491 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 KLRC2P26717 231 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 CA8P35219 290 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 CYLC1P35663 651 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PDE4CQ08493 712 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PDCLQ13371 301 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 DUSP6Q16828 381 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 ADGRD2Q7Z7M1 963 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 WDTC1Q8N5D0 677 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 C1orf131Q8NDD1 294 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 SLC22A17Q8WUG5 538 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 KCTD13Q8WZ19 329 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 SPATA17Q96L03 361 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 HSFY1Q96LI6 401 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PGLYRP2Q96PD5 576 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 RHOBTB2Q9BYZ6 727 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 DEF6Q9H4E7 631 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 NSUN3Q9H649 340 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 ADAMTS1Q9UHI8 967 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 DPP7Q9UHL4 492 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms