RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SHDQ96IW2 340 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 FBXL18Q96ME1 805 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 ACAP3Q96P50 834 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 YME1L1Q96TA2 773 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 MYCBPQ99417 103 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 NCAPGQ9BPX3 1015 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 TACO1Q9BSH4 297 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 MSTO1Q9BUK6 570 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 APOL6Q9BWW8 343 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 TMX1Q9H3N1 280 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 KIAA1586Q9HCI6 787 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 TOPORSQ9NS56 1045 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 KCNK4Q9NYG8 393 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 AGO2Q9UKV8 859 aaKnown RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 GIT1Q9Y2X7 761 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-209ENST00000479532 IPPQ9Y573 584 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 PCDHB2Q9Y5E7 798 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 PCDHB14Q9Y5E9 798 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 DNAH12Q6ZR08 3092 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 ZMYM2Q9UBW7 1377 aa6.69□□□□□ -1.34
SF3B1-209ENST00000479532 CITO14578 2027 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 BIN1O00499 593 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 PDXKO00764 312 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 OGTO15294 1046 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 XPOTO43592 962 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 MGEA5O60502 916 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF623O75123 536 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 PROZP22891 400 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 CALRP27797 417 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 EPHB4P54760 987 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 FAM189BP81408 668 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 DEFB103AP81534 67 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 RNASELQ05823 741 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 LRRC63Q05C16 580 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 MORC3Q14149 939 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 TPD52L1Q16890 204 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 CT47A1Q5JQC4 288 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 C9orf50Q5SZB4 431 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 SPOUT1Q5T280 376 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 EEF1DP3Q658K8 133 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 ISM2Q6H9L7 571 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 LRFN4Q6PJG9 635 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 ANKS3Q6ZW76 656 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 CBLL1Q75N03 491 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 C16orf59Q7L2K0 433 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF771Q7L3S4 317 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 USP37Q86T82 979 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 CDR2LQ86X02 465 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 HERC6Q8IVU3 1022 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 CD302Q8IX05 232 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 THNSL1Q8IYQ7 743 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 GPD1LQ8N335 351 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 MLKLQ8NB16 471 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 GIMAP7Q8NHV1 300 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 UBASH3BQ8TF42 649 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 TOP1MTQ969P6 601 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 PLPPR2Q96GM1 343 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 DHTKD1Q96HY7 919 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 FAM193BQ96PV7 902 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 STRA6Q9BX79 667 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 EIF2AQ9BY44 585 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 MRPL9Q9BYD2 267 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 NAT10Q9H0A0 1025 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 OSBPL2Q9H1P3 480 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 CDT1Q9H211 546 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 RPF1Q9H9Y2 349 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 RSAD1Q9HA92 442 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 ANO10Q9NW15 660 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 MSRAQ9UJ68 235 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 FRMD4BQ9Y2L6 1034 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 GDAQ9Y2T3 454 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 INSL6Q9Y581 213 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 RALGAPA2Q2PPJ7 1873 aa6.68□□□□□ -1.34
SF3B1-209ENST00000479532 TDRD15B5MCY1 1934 aaKnown RBP6.68□□□□□ -1.34
SF3B1-209ENST00000479532 TTC3P53804 2025 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 A0A0B4J269 797 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF233A6NK53 670 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 TBKBP1A7MCY6 615 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 ANKRD63C9JTQ0 380 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 CETN3O15182 167 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 EXTL3O43909 919 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 EXOC3O60645 756 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 GJB5O95377 273 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 DLGAP3O95886 979 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 EDN1P05305 212 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 CLTAP09496 248 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 CCDC192P0DO97 292 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 CCNE1P24864 410 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 PRCPP42785 496 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 CYP2J2P51589 502 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 OSTNP61366 133 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 POU5F1Q01860 360 aaKnown RBP6.67□□□□□ -1.34
SF3B1-209ENST00000479532 PAK1Q13153 545 aa6.67□□□□□ -1.34
SF3B1-209ENST00000479532 BTG3Q14201 252 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-209ENST00000479532 MYBPC2Q14324 1141 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms