RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 EXOC4Q96A65 974 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 COQ10AQ96MF6 247 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 FAM107BQ9H098 131 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 SLC12A5Q9H2X9 1139 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 WDCPQ9H6R7 721 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 RBM28Q9NW13 759 aaKnown RBP3.35□□□□□ -1.87
ATRX-205ENST00000479487 ZNF446Q9NWS9 450 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 SYBUQ9NX95 663 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 ZNF215Q9UL58 517 aaPredicted RBP3.35□□□□□ -1.87
ATRX-205ENST00000479487 RRP15Q9Y3B9 282 aaKnown RBP3.35□□□□□ -1.87
ATRX-205ENST00000479487 USP15Q9Y4E8 981 aaPredicted RBP3.35□□□□□ -1.87
ATRX-205ENST00000479487 LRRFIP2Q9Y608 721 aaKnown RBP3.35□□□□□ -1.87
ATRX-205ENST00000479487 SPAG9O60271 1321 aaKnown RBP3.35□□□□□ -1.87
ATRX-205ENST00000479487 AATKQ6ZMQ8 1374 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 NRXN1Q9ULB1 1477 aa3.35□□□□□ -1.87
ATRX-205ENST00000479487 PIPSLA2A3N6 862 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 GRID2IPA4D2P6 1211 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 ERN1O75460 977 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 RPS6KA5O75582 802 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TSPY4P0CV99 314 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TSPY10P0CW01 314 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 U2AF1L5P0DN76 240 aaPredicted RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 EGR2P11161 476 aaPredicted RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 MALP21145 153 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 DDX6P26196 483 aaKnown RBP eCLIP3.34□□□□□ -1.87
ATRX-205ENST00000479487 ZNF280AP59817 542 aaPredicted RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 RAP2BP61225 183 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 POU6F2P78424 691 aaPredicted RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 MXRA7P84157 204 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 U2AF1Q01081 240 aaKnown RBP eCLIP3.34□□□□□ -1.87
ATRX-205ENST00000479487 SCAPQ12770 1279 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TRDNQ13061 729 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 GTF2H3Q13889 308 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 PTPN14Q15678 1187 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 ZRSR1Q15695 479 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 ANKRD45Q5TZF3 282 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 EMC10Q5UCC4 262 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 ABHD17BQ5VST6 288 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 ZSCAN25Q6NSZ9 544 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TMCO3Q6UWJ1 677 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 KRBA2Q6ZNG9 492 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 UBE3BQ7Z3V4 1068 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TMPRSS9Q7Z410 1059 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 FAM90A1Q86YD7 464 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 CERS3Q8IU89 383 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 Q8NA96 180 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 SPC24Q8NBT2 197 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 C3orf20Q8ND61 904 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 NEK11Q8NG66 645 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TDRD7Q8NHU6 1098 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 ARHGAP45Q92619 1136 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 KAT5Q92993 513 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 HPS3Q969F9 1004 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 CLPTM1LQ96KA5 538 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 PNKPQ96T60 521 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 MLST8Q9BVC4 326 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TEX101Q9BY14 249 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 RTFDC1Q9BY42 306 aaPredicted RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 UBXN6Q9BZV1 441 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 METTL14Q9HCE5 456 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 MED4Q9NPJ6 270 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 AASDHPPTQ9NRN7 309 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 GNL3LQ9NVN8 582 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 SLC52A1Q9NWF4 448 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 DONSONQ9NYP3 566 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 RAI14Q9P0K7 980 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 G3BP2Q9UN86 482 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 THRAP3Q9Y2W1 955 aaKnown RBP3.34□□□□□ -1.87
ATRX-205ENST00000479487 NEU2Q9Y3R4 380 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 JRKLQ9Y4A0 524 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 ABCC4O15439 1325 aa3.34□□□□□ -1.87
ATRX-205ENST00000479487 TDRD9Q8NDG6 1382 aaKnown RBP3.34□□□□□ -1.88
ATRX-205ENST00000479487 PLCH2O75038 1416 aa3.34□□□□□ -1.88
ATRX-205ENST00000479487 ZFYVE9O95405 1425 aa3.34□□□□□ -1.88
ATRX-205ENST00000479487 CD109Q6YHK3 1445 aa3.34□□□□□ -1.88
ATRX-205ENST00000479487 ATP10DQ9P241 1426 aa3.34□□□□□ -1.88
ATRX-205ENST00000479487 FAM208AQ9UK61 1670 aaKnown RBP3.33□□□□□ -1.88
ATRX-205ENST00000479487 LOC102724159A0A0B4J2E5 919 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 CCDC196A0A1B0GTZ2 297 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 A0A1W2PS29 197 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 TCRBV7S2A1N4TA0A589 114 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 E7ENX8 843 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 MASP2O00187 686 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 F2RL2O00254 374 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 CCP110O43303 1012 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 CDKL5O76039 1030 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 PRSS23O95084 383 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 IL33O95760 270 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 CD1AP06126 327 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 FGFR4P22455 802 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 SLC6A2P23975 617 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 RAB27AP51159 221 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 ZNF75DP51815 510 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 GSDMDP57764 484 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 CXADRP78310 365 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 GUCY1B3Q02153 619 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 TAP2Q03519 686 aa3.33□□□□□ -1.88
ATRX-205ENST00000479487 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
ATRX-205ENST00000479487 NOGQ13253 232 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms