RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 SQORQ9Y6N5 450 aa11.55□□□□□ -0.56
GSDMB-209ENST00000479136 COL1A2P08123 1366 aa11.55□□□□□ -0.56
GSDMB-209ENST00000479136 WDR81Q562E7 1941 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 IGKV6-21A0A0C4DH24 114 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 MFAP3LO75121 409 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 OXSR1O95747 527 aaPredicted RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 LMNAP02545 664 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 APOEP02649 317 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 GJB1P08034 283 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 PABPC4LP0CB38 370 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 FECHP22830 423 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TKTP29401 623 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SKIV2L2P42285 1042 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TMED10P49755 219 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 FXR1P51114 621 aaKnown RBP eCLIP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 EFNA5P52803 228 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 NCALDP61601 193 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 OCRLQ01968 901 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 MTMR3Q13615 1198 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 MFSD10Q14728 455 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 ZNF572Q7Z3I7 529 aaPredicted RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 PASD1Q8IV76 773 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 FAM20CQ8IXL6 584 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 C12orf56Q8IXR9 622 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TRPV1Q8NER1 839 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 RAET1EQ8TD07 263 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 DPF3Q92784 378 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 VPS50Q96JG6 964 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TRPC7Q9HCX4 862 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SAR1BQ9Y6B6 198 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SMIM31A0A1B0GVY4 71 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 RRN3P2A6NIE6 340 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SOWAHDA6NJG2 315 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 INO80B-WBP1J3KQ70 363 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 GPR25O00155 361 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 HOXD8P13378 290 aaPredicted RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 CYBAP13498 195 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 ELNP15502 786 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 GPC3P51654 580 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 COX10Q12887 443 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TRIM32Q13049 653 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 MUM1Q2TAK8 710 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 GALNTL6Q49A17 601 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 WDR45BQ5MNZ6 344 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 Q6ZNX1 250 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 PIGWQ7Z7B1 504 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 EFHD2Q96C19 240 aaPredicted RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 CCDC51Q96ER9 411 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 MAELQ96JY0 434 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 NSMCE3Q96MG7 304 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 KATNAL1Q9BW62 490 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 LSM14BQ9BX40 385 aaKnown RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 INO80BQ9C086 356 aaPredicted RBP11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TMEM134Q9H6X4 195 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 AASDHPPTQ9NRN7 309 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SETD4Q9NVD3 440 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 ANKFY1Q9P2R3 1169 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 STK39Q9UEW8 545 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 SRRDQ9UH36 339 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 TMCC3Q9ULS5 477 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 USP20Q9Y2K6 914 aa11.54□□□□□ -0.56
GSDMB-209ENST00000479136 DOCK3Q8IZD9 2030 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 hCG_2014768A0A024R1R8 64 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 PABPN1LA6NDY0 278 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 SPTLC1O15269 473 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 DUSP11O75319 330 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 TRIM49P0CI25 452 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 TRIM49CP0CI26 452 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 SMIM10L2AP0DMW4 78 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 SMIM10L2BP0DMW5 78 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 RARBP10826 455 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 CCNFP41002 786 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 PSEN2P49810 448 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 MXI1P50539 228 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 RAD23BP54727 409 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 KCNJ2P63252 427 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 RELAQ04206 551 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 MAPK6Q16659 721 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 GNASQ5JWF2 1037 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 CCBE1Q6UXH8 406 aaPredicted RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 INTS8Q75QN2 995 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 TAS1R3Q7RTX0 852 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 PPP1R13LQ8WUF5 828 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 STARD8Q92502 1023 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 CHMP6Q96FZ7 201 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 ZNF333Q96JL9 665 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 C8orf48Q96LL4 319 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 TARS2Q9BW92 718 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 CNOT10Q9H9A5 744 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 ABCF3Q9NUQ8 709 aa11.53□□□□□ -0.56
GSDMB-209ENST00000479136 NOSIPQ9Y314 301 aaKnown RBP11.53□□□□□ -0.56
GSDMB-209ENST00000479136 LOC105371267A0A1B0GV96 52 aa11.52□□□□□ -0.56
GSDMB-209ENST00000479136 KMOO15229 486 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms