RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 CXCL12P48061 93 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 PDE6CP51160 858 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 AP3M2P53677 418 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 FZD5Q13467 585 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 KCNB1Q14721 858 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 PON2Q15165 354 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 MDH1BQ5I0G3 518 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 SCARA3Q6AZY7 606 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 FAM171BQ6P995 826 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 TSSK4Q6SA08 328 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 SPEM1Q8N4L4 309 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 KBTBD7Q8WVZ9 684 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 USP13Q92995 863 aaPredicted RBP9.33□□□□□ -0.92
XRCC6-208ENST00000478914 PAGE5Q96GU1 130 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 CCDC34Q96HJ3 373 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 MYRFLQ96LU7 910 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 CEP295NLQ96MC4 621 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
XRCC6-208ENST00000478914 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 KIAA1549LQ6ZVL6 1849 aa9.33□□□□□ -0.92
XRCC6-208ENST00000478914 ATP8B3O60423 1300 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 A8MXQ7 604 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 CALUO43852 315 aaPredicted RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 KLRC4O43908 158 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 TACC1O75410 805 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 CST3P01034 146 aaPredicted RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 P4HA1P13674 534 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 PTPN1P18031 435 aaKnown RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 TRIM21P19474 475 aaKnown RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 ID4P47928 161 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 IFNAR2P48551 515 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 MYL6P60660 151 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 FAM160A1Q05DH4 1040 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 TNK2Q07912 1038 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 GRSF1Q12849 480 aaKnown RBP eCLIP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 RUNX3Q13761 415 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 ZNF268Q14587 947 aaPredicted RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 PDGFRLQ15198 375 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 CCDC142Q17RM4 750 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 ZNF699Q32M78 642 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 ZNF667Q5HYK9 610 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 MAMSTRQ6ZN01 415 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 DENND5BQ6ZUT9 1274 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 LIMS2Q7Z4I7 341 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 KIAA2013Q8IYS2 634 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 ZNF687Q8N1G0 1237 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 CPA6Q8N4T0 437 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 ZBTB44Q8NCP5 570 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 MYCBPAPQ8TBZ2 947 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 PCED1BQ96HM7 432 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 SPATA17Q96L03 361 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 LRRC3BQ96PB8 259 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 MRPL45Q9BRJ2 306 aaKnown RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 EBF3Q9H4W6 596 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 CRTAC1Q9NQ79 661 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
XRCC6-208ENST00000478914 TRPM5Q9NZQ8 1165 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 CCL26Q9Y258 94 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 FRMD4BQ9Y2L6 1034 aa9.32□□□□□ -0.92
XRCC6-208ENST00000478914 PDXKO00764 312 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 LILRB5O75023 590 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 TADA3O75528 432 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 ABL1P00519 1130 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 NR3C1P04150 777 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 RPN1P04843 607 aaKnown RBP9.31□□□□□ -0.92
XRCC6-208ENST00000478914 PFKLP17858 780 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 HDCP19113 662 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 PPP3CCP48454 512 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 CASP4P49662 377 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 STK4Q13043 487 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 NR1H3Q13133 447 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 NCOA4Q13772 614 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 MTF1Q14872 753 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 TDRD10Q5VZ19 366 aaKnown RBP9.31□□□□□ -0.92
XRCC6-208ENST00000478914 CEP135Q66GS9 1140 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 TXNDC11Q6PKC3 985 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 SYNPOQ8N3V7 929 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 GPR161Q8N6U8 529 aaKnown RBP9.31□□□□□ -0.92
XRCC6-208ENST00000478914 ARL14EPQ8N8R7 260 aaPredicted RBP9.31□□□□□ -0.92
XRCC6-208ENST00000478914 SUMF1Q8NBK3 374 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 B3GALNT2Q8NCR0 500 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 KIAA0895Q8NCT3 520 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 PARD3BQ8TEW8 1205 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 ZNF516Q92618 1163 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 NELL1Q92832 810 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 ATP2A3Q93084 1043 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 TNIP3Q96KP6 325 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 SLITRK1Q96PX8 696 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 FAM83CQ9BQN1 747 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 MED10Q9BTT4 135 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 EPC1Q9H2F5 836 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 DUS2Q9NX74 493 aaKnown RBP9.31□□□□□ -0.92
XRCC6-208ENST00000478914 GMEB2Q9UKD1 530 aa9.31□□□□□ -0.92
XRCC6-208ENST00000478914 SMG5Q9UPR3 1016 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms