RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MYRFLQ96LU7 910 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 USP28Q96RU2 1077 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 PKMYT1Q99640 499 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 SYT15Q9BQS2 421 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 MAGEC2Q9UBF1 373 aaPredicted RBP14.19□□□□□ -0.14
VCL-205ENST00000478896 SIX4Q9UIU6 781 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 WNT6Q9Y6F9 365 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 KIAA1549LQ6ZVL6 1849 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 A0A087X0B3 334 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 ZNF233A6NK53 670 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 GABRDO14764 452 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 EPN2O95208 641 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 GRIK1P39086 918 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 PDE6CP51160 858 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 CYP27A1Q02318 531 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 NR1H3Q13133 447 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 STK38Q15208 465 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 SF3A2Q15428 464 aaKnown RBP14.18□□□□□ -0.14
VCL-205ENST00000478896 SURF1Q15526 300 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 NAIF1Q69YI7 327 aaPredicted RBP14.18□□□□□ -0.14
VCL-205ENST00000478896 SCARA3Q6AZY7 606 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 DPH6Q7L8W6 267 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 CXorf38Q8TB03 319 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 SH3RF2Q8TEC5 729 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 HPDLQ96IR7 371 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 SLC22A12Q96S37 553 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 CYP2S1Q96SQ9 504 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 MMS19Q96T76 1030 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 FBRSL1Q9HCM7 1045 aaKnown RBP14.18□□□□□ -0.14
VCL-205ENST00000478896 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 CDH9Q9ULB4 789 aa14.18□□□□□ -0.14
VCL-205ENST00000478896 PTPRDP23468 1912 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 C2orf78A6NCI8 922 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 ATP2C2O75185 946 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 AKAP3O75969 853 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 CLSTN1O94985 981 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 HDCP19113 662 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 SLC39A14Q15043 492 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 MAPRE1Q15691 268 aaKnown RBP14.17□□□□□ -0.14
VCL-205ENST00000478896 DUOXA2Q1HG44 320 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 CBWD2Q8IUF1 395 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 OR5B17Q8NGF7 314 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 LRRC27Q9C0I9 530 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 TNMDQ9H2S6 317 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 ZSCAN16Q9H4T2 348 aaPredicted RBP14.17□□□□□ -0.14
VCL-205ENST00000478896 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 POLR3BQ9NW08 1133 aaPredicted RBP14.17□□□□□ -0.14
VCL-205ENST00000478896 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
VCL-205ENST00000478896 PTPRJQ12913 1337 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 TRIM66O15016 1216 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 NFATC1O95644 943 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 PDGFRBP09619 1106 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 ZNF806P0C7X5 589 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 DLATP10515 647 aaKnown RBP14.16□□□□□ -0.14
VCL-205ENST00000478896 BDNFP23560 247 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 LMO2P25791 158 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 MPLP40238 635 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 MAGEA11P43364 429 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 RAP1GAPP47736 663 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 ASIC1P78348 528 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 DMC1Q14565 340 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 ELF2Q15723 593 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 EML3Q32P44 896 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 FAM171BQ6P995 826 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 VSTM1Q6UX27 236 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 DENND5BQ6ZUT9 1274 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 SYT13Q7L8C5 426 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 WDR49Q8IV35 697 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 RDH13Q8NBN7 331 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 CCDC26Q8TAB7 109 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 KBTBD7Q8WVZ9 684 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 HPS3Q969F9 1004 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 FNBP1Q96RU3 617 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 KIAA1586Q9HCI6 787 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 EHD2Q9NZN4 543 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 TRPM5Q9NZQ8 1165 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 GCNT4Q9P109 453 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 PCDHGA5Q9Y5G8 931 aa14.16□□□□□ -0.14
VCL-205ENST00000478896 FRYLO94915 3013 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 EIF3DO15371 548 aaKnown RBP eCLIP14.15□□□□□ -0.14
VCL-205ENST00000478896 APBB3O95704 486 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 ABL1P00519 1130 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 TNNI1P19237 187 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 WARSP23381 471 aaKnown RBP14.15□□□□□ -0.14
VCL-205ENST00000478896 GBP1P32455 592 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 DGKEP52429 567 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 LIMK1P53667 647 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 TNNC1P63316 161 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 AMPD3Q01432 767 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 IFRD2Q12894 506 aaPredicted RBP14.15□□□□□ -0.14
VCL-205ENST00000478896 MDH1BQ5I0G3 518 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 HS2ST1Q7LGA3 356 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 GLIS3Q8NEA6 775 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 TSTD1Q8NFU3 115 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 OR6B3Q8NGW1 331 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 DHX58Q96C10 678 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 PCED1BQ96HM7 432 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 CHAMP1Q96JM3 812 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 SPATA17Q96L03 361 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 SNX25Q9H3E2 840 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms