RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	MYL6	P60660	151 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	RBP5	P82980	135 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TFAM	Q00059	246 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	INCA1	Q0VD86	236 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	CFAP221	Q4G0U5	840 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	STXBP5	Q5T5C0	1151 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DPY19L2P1	Q6NXN4	242 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DPH6	Q7L8W6	267 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SYCP3	Q8IZU3	236 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SLC44A3	Q8N4M1	653 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	CSGALNACT2	Q8N6G5	542 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ATAD1	Q8NBU5	361 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	GOLGA5	Q8TBA6	731 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	BAP1	Q92560	729 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ELMO3	Q96BJ8	720 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	MYRFL	Q96LU7	910 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ASB16	Q96NS5	453 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	GSDMA	Q96QA5	445 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DPEP3	Q9H4B8	488 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SMYD3	Q9H7B4	428 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	IL37	Q9NZH6	218 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	IGSF9	Q9P2J2	1179 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	HMGXB4	Q9UGU5	601 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	NUB1	Q9Y5A7	615 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	NUMBL	Q9Y6R0	609 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	MYBPHL	A2RUH7	354 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ATP2C2	O75185	946 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ATIC	P31939	592 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	MAGEA11	P43364	429 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	MARS	P56192	900 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TCF15	Q12870	199 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	BFSP1	Q12934	665 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DUSP4	Q13115	394 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DUOXA2	Q1HG44	320 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	LINC01559	Q495D7	138 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	PABPC1L	Q4VXU2	614 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SLC39A12	Q504Y0	691 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM78A	Q5JUQ0	283 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	VIT	Q6UXI7	678 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DSTYK	Q6XUX3	929 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	GET4	Q7L5D6	327 aa	Predicted RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ADGRF2	Q8IZF7	708 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TMEM105	Q8N8V8	129 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ARMC2	Q8NEN0	867 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	LMO3	Q8TAP4	145 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SEMA4D	Q92854	862 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	NXPE3	Q969Y0	559 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRMT2B	Q96GJ1	504 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	HPDL	Q96IR7	371 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ANKRD36BP1	Q96IX9	119 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	PGLYRP2	Q96PD5	576 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TTLL2	Q9BWV7	592 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	COQ4	Q9Y3A0	265 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM92A	A1XBS5	289 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRIM49B	A6NDI0	452 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	HHLA1	C9JL84	531 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TNFRSF10B	O14763	440 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	IKBKB	O14920	756 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	PMM2	O15305	246 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SLC16A3	O15427	465 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	XYLB	O75191	536 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	PRPF40A	O75400	957 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ACAT1	P24752	427 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SMARCB1	Q12824	385 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TDG	Q13569	410 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	MTMR3	Q13615	1198 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	LIN9	Q5TKA1	542 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ANKRD40	Q6AI12	368 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TANGO2	Q6ICL3	276 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	RBM43	Q6ZSC3	357 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SV2A	Q7L0J3	742 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	STKLD1	Q8NE28	680 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZMIZ2	Q8NF64	920 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SPPL2B	Q8TCT7	592 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	CACTIN	Q8WUQ7	758 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ELSPBP1	Q96BH3	223 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	TWNK	Q96RR1	684 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	CYP4F11	Q9HBI6	524 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	DDX43	Q9NXZ2	648 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	GDE1	Q9NZC3	331 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	GCNT4	Q9P109	453 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	NXF1	Q9UBU9	619 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	FKBPL	Q9UIM3	349 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	MYH10	P35580	1976 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	CACNA1A	O00555	2505 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	PRAMEF12	O95522	483 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	OLFM2	O95897	454 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	TMEM191B	P0C7N4	346 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRIM49	P0CI25	452 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRIM49C	P0CI26	452 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	SRF	P11831	508 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	TDGF1	P13385	188 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	GLUL	P15104	373 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	TCF3	P15923	654 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	PTPN2	P17706	415 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	NR2F2	P24468	414 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	RAP1GAP	P47736	663 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	AP3M2	P53677	418 aa		4.53	□□□□□ -1.68
POLR2B-208	ENST00000478188	STARD6	P59095	220 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms