RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 ARNTLO00327 626 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 TRIM66O15016 1216 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 AKAP3O75969 853 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 VNN1O95497 513 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 KRT13P13646 458 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 TARSP26639 723 aaKnown RBP14.72□□□□□ -0.05
HDAC7-222ENST00000477937 ANXA13P27216 316 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 VAMP7P51809 220 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 CDH8P55286 799 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 PLCB2Q00722 1185 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 FAM160A1Q05DH4 1040 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 INTS8Q75QN2 995 aaKnown RBP14.72□□□□□ -0.05
HDAC7-222ENST00000477937 SV2AQ7L0J3 742 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 MON1AQ86VX9 555 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 FAM186BQ8IYM0 893 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 B3GALNT2Q8NCR0 500 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 ENGASEQ8NFI3 743 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 FAM3CQ92520 227 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 TAF4BQ92750 862 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 SPATA17Q96L03 361 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 GSDMAQ96QA5 445 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 C8orf33Q9H7E9 229 aaPredicted RBP14.72□□□□□ -0.05
HDAC7-222ENST00000477937 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 EHD2Q9NZN4 543 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 HOOK1Q9UJC3 728 aaKnown RBP14.72□□□□□ -0.05
HDAC7-222ENST00000477937 NDRG2Q9UN36 371 aaKnown RBP14.72□□□□□ -0.05
HDAC7-222ENST00000477937 NME7Q9Y5B8 376 aa14.72□□□□□ -0.05
HDAC7-222ENST00000477937 HELZP42694 1942 aaKnown RBP14.72□□□□□ -0.05
HDAC7-222ENST00000477937 SHISA7A6NL88 538 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 SMC2O95347 1197 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 CCNE1P24864 410 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 PSMC2P35998 433 aaKnown RBP14.71□□□□□ -0.05
HDAC7-222ENST00000477937 RPS9P46781 194 aaKnown RBP14.71□□□□□ -0.05
HDAC7-222ENST00000477937 KPNA1P52294 538 aaPredicted RBP14.71□□□□□ -0.05
HDAC7-222ENST00000477937 ENPEPQ07075 957 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 EDRF1Q3B7T1 1238 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 C1orf228Q6PIY5 440 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 DENND5BQ6ZUT9 1274 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 SMYD4Q8IYR2 804 aaPredicted RBP14.71□□□□□ -0.05
HDAC7-222ENST00000477937 MSANTD3Q96H12 275 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 ZFYVE19Q96K21 471 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 TNIP3Q96KP6 325 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 TIGD1Q96MW7 591 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 ELOVL4Q9GZR5 314 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 SMG9Q9H0W8 520 aaKnown RBP14.71□□□□□ -0.05
HDAC7-222ENST00000477937 DPEP3Q9H4B8 488 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 SMYD3Q9H7B4 428 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 KIF9Q9HAQ2 790 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 SPATA6Q9NWH7 488 aaPredicted RBP14.71□□□□□ -0.05
HDAC7-222ENST00000477937 F5P12259 2224 aa14.71□□□□□ -0.05
HDAC7-222ENST00000477937 LAMTOR5O43504 91 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 GFRA3O60609 400 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 TADA3O75528 432 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 ASS1P00966 412 aaKnown RBP14.7□□□□□ -0.06
HDAC7-222ENST00000477937 HLA-DRAP01903 254 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 USP17L7P0C7H9 530 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 PIK3CAP42336 1068 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 RAP1GAPP47736 663 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 ZCWPW2Q504Y3 356 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 C1orf220Q5T0J3 134 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 ZNF658Q5TYW1 1059 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-222ENST00000477937 SCARA5Q6ZMJ2 495 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 FRMD5Q7Z6J6 570 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 USP13Q92995 863 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-222ENST00000477937 NKD2Q969F2 451 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-222ENST00000477937 SMARCE1Q969G3 411 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 ELMO3Q96BJ8 720 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 C8orf48Q96LL4 319 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 B3GNT5Q9BYG0 378 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 GTPBP4Q9BZE4 634 aaKnown RBP14.7□□□□□ -0.06
HDAC7-222ENST00000477937 IMPG2Q9BZV3 1241 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 TRPC7Q9HCX4 862 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 GKN1Q9NS71 199 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 GTSE1Q9NYZ3 720 aa14.7□□□□□ -0.06
HDAC7-222ENST00000477937 ATP8B3O60423 1300 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 TRAV19A0A0A6YYK7 116 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 F8VP50 259 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 CLDN5O00501 218 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 SP9P0CG40 484 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 TRIM49P0CI25 452 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 TRIM49CP0CI26 452 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 PRCPP42785 496 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 PPP3CCP48454 512 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 GCLMP48507 274 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 NOP14P78316 857 aaKnown RBP14.69□□□□□ -0.06
HDAC7-222ENST00000477937 FZD5Q13467 585 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 ZNF268Q14587 947 aaPredicted RBP14.69□□□□□ -0.06
HDAC7-222ENST00000477937 COBLL1Q53SF7 1204 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 RALGPS2Q86X27 583 aaPredicted RBP14.69□□□□□ -0.06
HDAC7-222ENST00000477937 ZNF687Q8N1G0 1237 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 TTC8Q8TAM2 541 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 CYP2S1Q96SQ9 504 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 MED10Q9BTT4 135 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 SDCBP2Q9H190 292 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 LMAN1LQ9HAT1 526 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 TRPM5Q9NZQ8 1165 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 CCL26Q9Y258 94 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 PCDHA5Q9Y5H7 936 aa14.69□□□□□ -0.06
HDAC7-222ENST00000477937 SPECC1L-ADORA2AF8WAN1 911 aa14.68□□□□□ -0.06
HDAC7-222ENST00000477937 CETN3O15182 167 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms