RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RFPL2O75678 378 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 BEST1O76090 585 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 CFHP08603 1231 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 POU2F2P09086 479 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 ADORA2BP29275 332 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 TUFMP49411 452 aaKnown RBP21.14■□□□□ 0.97
ACTB-210ENST00000477812 GPR15P49685 360 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 BPIFB4P59827 614 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 PTK2Q05397 1052 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 STILQ15468 1287 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 MEA1Q16626 185 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 MGAT5BQ3V5L5 792 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 LIN9Q5TKA1 542 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 ANKRD54Q6NXT1 300 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 SYCE2Q6PIF2 218 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 CLEC20AQ6ZU45 233 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 NOP9Q86U38 636 aaKnown RBP21.14■□□□□ 0.97
ACTB-210ENST00000477812 ANKRD52Q8NB46 1076 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 OLIG1Q8TAK6 271 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 CPLX3Q8WVH0 158 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 ZNF606Q8WXB4 792 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 ZNF707Q96C28 371 aaPredicted RBP21.14■□□□□ 0.97
ACTB-210ENST00000477812 SEPT5Q99719 369 aaPredicted RBP21.14■□□□□ 0.97
ACTB-210ENST00000477812 SMOQ99835 787 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 MED10Q9BTT4 135 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 ZDHHC7Q9NXF8 308 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 DPP7Q9UHL4 492 aa21.14■□□□□ 0.97
ACTB-210ENST00000477812 THAP12O43422 761 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 AP1G2O75843 785 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 MICAL2O94851 1124 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 CCDC85BQ15834 202 aaPredicted RBP21.13■□□□□ 0.97
ACTB-210ENST00000477812 CMASQ8NFW8 434 aaPredicted RBP21.13■□□□□ 0.97
ACTB-210ENST00000477812 SYN2Q92777 582 aaPredicted RBP21.13■□□□□ 0.97
ACTB-210ENST00000477812 MSLNLQ96KJ4 702 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 C8orf48Q96LL4 319 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 SYT11Q9BT88 431 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 DUSP16Q9BY84 665 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 SFXN1Q9H9B4 322 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 DMAP1Q9NPF5 467 aaPredicted RBP21.13■□□□□ 0.97
ACTB-210ENST00000477812 CLDND1Q9NY35 253 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 LUC7L2Q9Y383 392 aaKnown RBP21.13■□□□□ 0.97
ACTB-210ENST00000477812 PRUNE2Q8WUY3 3088 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 PATJQ8NI35 1801 aa21.13■□□□□ 0.97
ACTB-210ENST00000477812 F8VP50 259 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 MFAP3LO75121 409 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 HNRNPA1P09651 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
ACTB-210ENST00000477812 FAM200BP0CF97 657 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 SRGAP2BP0DMP2 458 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 FERP16591 822 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 NPR3P17342 541 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 CHRNB2P17787 502 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 HNRNPH3P31942 346 aaKnown RBP21.12■□□□□ 0.97
ACTB-210ENST00000477812 KRT9P35527 623 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 TWF1Q12792 350 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 DDR2Q16832 855 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 PPM1LQ5SGD2 360 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 ELMSAN1Q6PJG2 1045 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 C12orf76Q8N812 135 aaPredicted RBP21.12■□□□□ 0.97
ACTB-210ENST00000477812 SLC20A1Q8WUM9 679 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 KCNK16Q96T55 309 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 DNAJC7Q99615 494 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 NUCKS1Q9H1E3 243 aaKnown RBP21.12■□□□□ 0.97
ACTB-210ENST00000477812 PCDHGC3Q9UN70 934 aa21.12■□□□□ 0.97
ACTB-210ENST00000477812 XIRP2A4UGR9 3374 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.11■□□□□ 0.97
ACTB-210ENST00000477812 HHLA1C9JL84 531 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 MED7O43513 233 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 HOXB8P17481 243 aaPredicted RBP21.11■□□□□ 0.97
ACTB-210ENST00000477812 SSTR3P32745 418 aaPredicted RBP21.11■□□□□ 0.97
ACTB-210ENST00000477812 PRKCIP41743 596 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 MRE11P49959 708 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 PDE6CP51160 858 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 BCAT1P54687 386 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 RPL10AP62906 217 aaKnown RBP21.11■□□□□ 0.97
ACTB-210ENST00000477812 ARID5AQ03989 594 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 GSE1Q14687 1217 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 SFMBT2Q5VUG0 894 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 SDHAF4Q5VUM1 108 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 DENND1BQ6P3S1 775 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 FMNL3Q8IVF7 1028 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 ZNF397Q8NF99 534 aaPredicted RBP21.11■□□□□ 0.97
ACTB-210ENST00000477812 SPATA17Q96L03 361 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 CEP295NLQ96MC4 621 aa21.11■□□□□ 0.97
ACTB-210ENST00000477812 M0QYV0 167 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 TULP2O00295 520 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 TNFRSF10BO14763 440 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 TRIM66O15016 1216 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 SETSIPP0DME0 302 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 GRIK1P39086 918 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 MAP3K7CLP57077 242 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 PDE4CQ08493 712 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 GOLGA8FQ08AF8 430 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 GOLGA8DPQ0D2H9 430 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 PLD1Q13393 1074 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 ASIC2Q16515 512 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 HGSNATQ68CP4 663 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.1■□□□□ 0.97
ACTB-210ENST00000477812 SCN4BQ8IWT1 228 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 MAFAQ8NHW3 353 aaPredicted RBP21.1■□□□□ 0.97
ACTB-210ENST00000477812 UBA3Q8TBC4 463 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms