RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SPTBN5Q9NRC6 3674 aaKnown RBP12.81□□□□□ -0.36
PRPF39-203ENST00000477626 CCDC188H7C350 402 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 AGPSO00116 658 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 KRT19P08727 400 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
PRPF39-203ENST00000477626 TAF6P49848 677 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 DRICH1Q6PGQ1 229 aaPredicted RBP12.81□□□□□ -0.36
PRPF39-203ENST00000477626 RSPH3Q86UC2 560 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 CMASQ8NFW8 434 aaPredicted RBP12.81□□□□□ -0.36
PRPF39-203ENST00000477626 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 VNN2O95498 520 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 CDKN2BP42772 138 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 DRG2P55039 364 aaKnown RBP12.81□□□□□ -0.36
PRPF39-203ENST00000477626 MESDQ14696 234 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 STILQ15468 1287 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 SV2CQ496J9 727 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 CCDC14Q49A88 953 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 SGO2Q562F6 1265 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 EXD1Q8NHP7 514 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 CASD1Q96PB1 797 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 SNX9Q9Y5X1 595 aa12.81□□□□□ -0.36
PRPF39-203ENST00000477626 GBF1Q92538 1859 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 DDHD2O94830 711 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 LINC00271P0C7V0 271 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 P4HA1P13674 534 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 FAAP100Q0VG06 881 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 GRIK3Q13003 919 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 PAK2Q13177 524 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 VSIG1Q86XK7 387 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF560Q96MR9 790 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 B3GNT5Q9BYG0 378 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 MRPL47Q9HD33 250 aaKnown RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 IP6K2Q9UHH9 426 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 PODXLO00592 558 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 FGGP02679 453 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 TUBBP07437 444 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 RBM10P98175 930 aaKnown RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ACAP1Q15027 740 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 GOLGA7BQ2TAP0 167 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ACOT1Q86TX2 421 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ARMC5Q96C12 935 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 MCEEQ96PE7 176 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 STRIP2Q9ULQ0 834 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 NEU3Q9UQ49 428 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF487B1APH4 448 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 E5RJQ4 531 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 SART1O43290 800 aaKnown RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ATP2C2O75185 946 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 PCK1P35558 622 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 SCNN1GP51170 649 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF143P52747 638 aaPredicted RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 LONRF2Q1L5Z9 754 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 SLC2A13Q96QE2 648 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 WDR35Q9P2L0 1181 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 GINS2Q9Y248 185 aa12.8□□□□□ -0.36
PRPF39-203ENST00000477626 R3HDM2Q9Y2K5 976 aaKnown RBP12.8□□□□□ -0.36
PRPF39-203ENST00000477626 H0YGN5 161 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 CCDC130P13994 396 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 KLRC2P26717 231 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TNNC1P63316 161 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 SH3PXD2AQ5TCZ1 1133 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TWF2Q6IBS0 349 aaKnown RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 B3GALNT2Q8NCR0 500 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TBX21Q9UL17 535 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 EFR3BQ9Y2G0 817 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TRIM17Q9Y577 477 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 NFS1Q9Y697 457 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 PHF2O75151 1096 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TFE3P19532 575 aaPredicted RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 PAX3P23760 479 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 ADGRF2Q8IZF7 708 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 CLEC4CQ8WTT0 213 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 SCLT1Q96NL6 688 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TOX2Q96NM4 488 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 SH3GL2Q99962 352 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 ADAM2Q99965 735 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 UBN1Q9NPG3 1134 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 MARCH5Q9NX47 278 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 I6L893 689 aaPredicted RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 XPO1O14980 1071 aaKnown RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 IGLV3-25P01717 112 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 THP07101 528 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 FLT3P36888 993 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 PDE4CQ08493 712 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 NNTQ13423 1086 aa12.79□□□□□ -0.36
PRPF39-203ENST00000477626 PIGHQ14442 188 aaPredicted RBP12.79□□□□□ -0.36
PRPF39-203ENST00000477626 TAF5Q15542 800 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms