RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TISP43B9A030 160 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 H0YIZ8 118 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ZNF213O14771 459 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 DCLK1O15075 740 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ALDH1L1O75891 902 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 NXPH3O95157 252 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 IL33O95760 270 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 FESP07332 822 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 TYRP14679 529 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 EPHB2P29323 1055 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 RECQLP46063 649 aaPredicted RBP5.16□□□□□ -1.58
UBR3-209ENST00000477461 EPHB1P54762 984 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 EEFSECP57772 596 aaKnown RBP5.16□□□□□ -1.58
UBR3-209ENST00000477461 SUPT20HL1Q3ZLR7 823 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 SLC44A4Q53GD3 710 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ZNF618Q5T7W0 954 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ARHGAP40Q5TG30 622 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ICE2Q659A1 982 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 LAYNQ6UX15 382 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 USP45Q70EL2 814 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 PRR18Q8N4B5 295 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 LRRC71Q8N4P6 559 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 PUS7Q96PZ0 661 aaKnown RBP5.16□□□□□ -1.58
UBR3-209ENST00000477461 BHMT2Q9H2M3 363 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ZDHHC8Q9ULC8 765 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 MAGI3Q5TCQ9 1506 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ZNF804BA4D1E1 1349 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 CCNB3Q8WWL7 1395 aa5.16□□□□□ -1.58
UBR3-209ENST00000477461 ITSN2Q9NZM3 1697 aa5.15□□□□□ -1.58
UBR3-209ENST00000477461 NCOA2Q15596 1464 aa5.15□□□□□ -1.58
UBR3-209ENST00000477461 IL6RP08887 468 aaPredicted RBP5.15□□□□□ -1.59
UBR3-209ENST00000477461 POU2F2P09086 479 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 LILRA4P59901 499 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 SSBP2P81877 361 aaPredicted RBP5.15□□□□□ -1.59
UBR3-209ENST00000477461 TCF15Q12870 199 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 TTF1Q15361 905 aaPredicted RBP5.15□□□□□ -1.59
UBR3-209ENST00000477461 PLEKHG6Q3KR16 790 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 LONRF3Q496Y0 759 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 SLC2A7Q6PXP3 512 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 DTX2Q86UW9 622 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 CELF5Q8N6W0 485 aaKnown RBP5.15□□□□□ -1.59
UBR3-209ENST00000477461 DDX17Q92841 729 aaKnown RBP5.15□□□□□ -1.59
UBR3-209ENST00000477461 ZBTB9Q96C00 473 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 NELL2Q99435 816 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 NRIP3Q9NQ35 241 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 CCNL1Q9UK58 526 aaPredicted RBP5.15□□□□□ -1.59
UBR3-209ENST00000477461 PCDHA6Q9UN73 950 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 SSX2IPQ9Y2D8 614 aa5.15□□□□□ -1.59
UBR3-209ENST00000477461 MYO5CQ9NQX4 1742 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 KRTAP29-1A8MX34 341 aaPredicted RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 PRRT4C9JH25 899 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 hCG_1984214I3L0E3 225 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 PPP6CO00743 305 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 SLC16A6O15403 523 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 SLC16A3O15427 465 aaKnown RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 DTNBO60941 627 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 ABLIM3O94929 683 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 UNC5CO95185 931 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 LATS1O95835 1130 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 PIM1P11309 404 aaPredicted RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 ITGB6P18564 788 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 CYP4F2P78329 520 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 MCL1Q07820 350 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 AARS2Q5JTZ9 985 aaKnown RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 SLC18B1Q6NT16 456 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 C11orf87Q6NUJ2 197 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 ZBTB46Q86UZ6 589 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 PNLDC1Q8NA58 520 aaKnown RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 XAGE5Q8WWM1 108 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 GLG1Q92896 1179 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 RPL36ALQ969Q0 106 aaKnown RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 R3HDM4Q96D70 268 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 NUP88Q99567 741 aaPredicted RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 GTPBP4Q9BZE4 634 aaKnown RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 ARMT1Q9H993 441 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 HESX1Q9UBX0 185 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 CPA4Q9UI42 421 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 MRPS17Q9Y2R5 130 aaKnown RBP5.14□□□□□ -1.59
UBR3-209ENST00000477461 ZNF521Q96K83 1311 aa5.14□□□□□ -1.59
UBR3-209ENST00000477461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.13□□□□□ -1.59
UBR3-209ENST00000477461 TTC37Q6PGP7 1564 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 ABCA9Q8IUA7 1624 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 DNAJB5O75953 348 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 PDE8BO95263 885 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 VCAM1P19320 739 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 KCNJ5P48544 419 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 PXNP49023 591 aaPredicted RBP5.13□□□□□ -1.59
UBR3-209ENST00000477461 TUBA4AP68366 448 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 PLS1Q14651 629 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 RGS7BPQ6MZT1 257 aaPredicted RBP5.13□□□□□ -1.59
UBR3-209ENST00000477461 ANKRD16Q6P6B7 361 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 NEK8Q86SG6 692 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 CNGA4Q8IV77 575 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 ATG4AQ8WYN0 398 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 DUSP22Q9NRW4 184 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 CFDP1Q9UEE9 299 aaPredicted RBP5.13□□□□□ -1.59
UBR3-209ENST00000477461 LUC7L2Q9Y383 392 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms