RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 ATXN2LQ8WWM7 1075 aaKnown RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 PIWIL1Q96J94 861 aaKnown RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 PEBP4Q96S96 227 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 OSMRQ99650 979 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 FAM49AQ9H0Q0 323 aaPredicted RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 ZWILCHQ9H900 591 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 TLDC2A0PJX2 215 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 C2CD4BA6NLJ0 364 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 EBAG9O00559 213 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 ENDOD1O94919 500 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 TRUB2O95900 331 aaKnown RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 CD48P09326 243 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 MIPP30301 263 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 PCK1P35558 622 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 SLCO1A2P46721 670 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 MYO1EQ12965 1108 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 KYNUQ16719 465 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 HADHQ16836 314 aaKnown RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 LONRF1Q17RB8 773 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 SKIDA1Q1XH10 827 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 CST9Q5W186 159 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 FAM183BPQ6ZVS7 135 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 GSTA5Q7RTV2 222 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 TLK2Q86UE8 772 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 LRRC52Q8N7C0 313 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 C12orf29Q8N999 325 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 PPP1R13LQ8WUF5 828 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 LENG1Q96BZ8 264 aaPredicted RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 SLC5A4Q9NY91 659 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 EURLQ9NYK6 297 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 ZNF148Q9UQR1 794 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 GMNCA6NCL1 334 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 C5orf60A6NFR6 353 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 E5RJQ4 531 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 ARSEP51690 589 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 MFSD10Q14728 455 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 STILQ15468 1287 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 TAF5Q15542 800 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 ZFYVE27Q5T4F4 411 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 RNASEH2BQ5TBB1 312 aaKnown RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 CATSPER4Q7RTX7 472 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 TMEM40Q8WWA1 233 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 HAUS1Q96CS2 278 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 PCDH9Q9HC56 1237 aa12.08□□□□□ -0.48
NUP188-205ENST00000477069 PPANQ9NQ55 473 aaKnown RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
NUP188-205ENST00000477069 E7EVH7 732 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 MYO1CO00159 1063 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 IGF2BP3O00425 579 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP188-205ENST00000477069 CYP2C9P11712 490 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 CHN1P15882 459 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 PSMC4P43686 418 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 CORO7P57737 925 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 PPP1R26Q5T8A7 1209 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 FAM102AQ5T9C2 384 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 APBB1IPQ7Z5R6 666 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 EXOC3L1Q86VI1 746 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 TTC30AQ86WT1 665 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 C18orf25Q96B23 403 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 STMN4Q9H169 189 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 NXF3Q9H4D5 531 aaKnown RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 USP18Q9UMW8 372 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 HES2Q9Y543 173 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 DPYSL4O14531 572 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 ABHD2P08910 425 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 GPD1P21695 349 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 HOXC8P31273 242 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 PPARDQ03181 441 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■□□□□ 8.4
NUP188-205ENST00000477069 XPO6Q96QU8 1125 aaKnown RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 LGALS13Q9UHV8 139 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 TPX2Q9ULW0 747 aaKnown RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 PIRO00625 290 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 CST8O60676 142 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 GABBR2O75899 941 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 RECQL4O94761 1208 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 AXLP30530 894 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 MORF4L2Q15014 288 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 RAB6CQ53S08 254 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 SH3PXD2AQ5TCZ1 1133 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 C9orf57Q5W0N0 161 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 OLFML1Q6UWY5 402 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 ACTL9Q8TC94 416 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 CNPY3Q9BT09 278 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms