RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BRAFP15056 766 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 RDXP35241 583 aaKnown RBP17.3■□□□□ 0.36
TMEM53-208ENST00000476724 PHKA2P46019 1235 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 OSTNP61366 133 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 PTPN20Q4JDL3 420 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 MTHFD1LQ6UB35 978 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 ARHGEF18Q6ZSZ5 1173 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 TLK2Q86UE8 772 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 IFNLR1Q8IU57 520 aaPredicted RBP17.3■□□□□ 0.36
TMEM53-208ENST00000476724 C9orf72Q96LT7 481 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 PWWP2AQ96N64 755 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 VRTNQ9H8Y1 702 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 CYP3A43Q9HB55 503 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 SHOC2Q9UQ13 582 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 COL1A2P08123 1366 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 A6NJR5 290 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 MAGEB2O15479 319 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 AOC2O75106 756 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
TMEM53-208ENST00000476724 VTNP04004 478 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 CXCL8P10145 99 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 P4HA1P13674 534 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 RFC1P35251 1148 aaPredicted RBP17.29■□□□□ 0.36
TMEM53-208ENST00000476724 RAD23BP54727 409 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 GRIK4Q16099 956 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 CYP4A22Q5TCH4 519 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 CDR2LQ86X02 465 aaPredicted RBP17.29■□□□□ 0.36
TMEM53-208ENST00000476724 TDRPQ86YL5 185 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 SUGP1Q8IWZ8 645 aaKnown RBP17.29■□□□□ 0.36
TMEM53-208ENST00000476724 SLC35B2Q8TB61 432 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 SOCS4Q8WXH5 440 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 PHACTR1Q9C0D0 580 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 IFT122Q9HBG6 1241 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 KCNK9Q9NPC2 374 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 EURLQ9NYK6 297 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 POLIQ9UNA4 740 aa17.29■□□□□ 0.36
TMEM53-208ENST00000476724 A0A087WZ62 844 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 IFNAR2P48551 515 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
TMEM53-208ENST00000476724 CAP1Q01518 475 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 GPS1Q13098 491 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 FBXW10Q5XX13 1052 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 TXNRD3NBQ6F5E7 133 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 CEP120Q8N960 986 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 CKAP2Q8WWK9 683 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 ELAC2Q9BQ52 826 aaKnown RBP17.28■□□□□ 0.36
TMEM53-208ENST00000476724 FDXACB1Q9BRP7 624 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-208ENST00000476724 SAYSD1Q9NPB0 183 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 UBN1Q9NPG3 1134 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 SIX4Q9UIU6 781 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 GABRQQ9UN88 632 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 AKT3Q9Y243 479 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 C3orf70A6NLC5 250 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-208ENST00000476724 ALOX15BO15296 676 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
TMEM53-208ENST00000476724 PLCB3Q01970 1234 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 SLC25A11Q02978 314 aaKnown RBP17.28■□□□□ 0.36
TMEM53-208ENST00000476724 TAZQ16635 292 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 CCDC142Q17RM4 750 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 PPP1R21Q6ZMI0 780 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 TTC39CQ8N584 583 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 C1orf127Q8N9H9 656 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 SETD4Q9NVD3 440 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 NKIRAS1Q9NYS0 192 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 CTNNAL1Q9UBT7 734 aa17.28■□□□□ 0.36
TMEM53-208ENST00000476724 LACTBL1A8MY62 500 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 GOLGA8SH3BPF8 625 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 GPR25O00155 361 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 SMAPO00193 183 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 DNM1LO00429 736 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 SNX3O60493 162 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 LRCH4O75427 683 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 GSTA1P08263 222 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 STAG3L1P0CL83 205 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 GABRB2P47870 512 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 BEX3Q00994 111 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 PTPN11Q06124 597 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-208ENST00000476724 RASA2Q15283 850 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 RNASEH2BQ5TBB1 312 aaKnown RBP17.27■□□□□ 0.36
TMEM53-208ENST00000476724 BBS12Q6ZW61 710 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 CENPUQ71F23 418 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 PRUNE1Q86TP1 453 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 TMEM176AQ96HP8 235 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 SYNCQ9H7C4 482 aa17.27■□□□□ 0.36
TMEM53-208ENST00000476724 SGK1O00141 431 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 CILPO75339 1184 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 PECAM1P16284 738 aaPredicted RBP17.27■□□□□ 0.35
TMEM53-208ENST00000476724 KDELR1P24390 212 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 PSMC4P43686 418 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 SCTRP47872 440 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 IRF5Q13568 498 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 XYLT1Q86Y38 959 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 CYP4X1Q8N118 509 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 GLIS1Q8NBF1 620 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 SLC4A11Q8NBS3 891 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 TRPV1Q8NER1 839 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 MAML1Q92585 1016 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 SGSM3Q96HU1 749 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms