RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 RABGEF1Q9UJ41 708 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 CCPG1Q9ULG6 757 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 POMPQ9Y244 141 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 HEMK1Q9Y5R4 338 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 TRPM3Q9HCF6 1732 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 hCG_1984214I3L0E3 225 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 I3L4J1 428 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 ZNF701M0R085 212 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-206ENST00000476391 MORF4L2Q15014 288 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 ACAP1Q15027 740 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 CENPSQ8N2Z9 138 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 TRIML2Q8N7C3 387 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 ZNF713Q8N859 430 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-206ENST00000476391 RAB3IL1Q8TBN0 382 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 HAS1Q92839 578 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 TTC17Q96AE7 1141 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 C12orf65Q9H3J6 166 aaKnown RBP14.43□□□□□ -0.1
HDAC1-206ENST00000476391 CDH22Q9UJ99 828 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 ATRNL1Q5VV63 1379 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 TOGARAM1Q9Y4F4 1720 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 E5RJQ4 531 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 TFPTP0C1Z6 253 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 KCNA6P17658 529 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 SLC25A3Q00325 362 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 IQCF2Q8IXL9 164 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 CCDC33Q8N5R6 958 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 TSPAN14Q8NG11 270 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 SHKBP1Q8TBC3 707 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 SREK1Q8WXA9 508 aaKnown RBP14.43□□□□□ -0.1
HDAC1-206ENST00000476391 APOPT1Q96IL0 206 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 HERPUD2Q9BSE4 406 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 ADAM33Q9BZ11 813 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 LIN28AQ9H9Z2 209 aaKnown RBP14.43□□□□□ -0.1
HDAC1-206ENST00000476391 VPS45Q9NRW7 570 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 GIN1Q9NXP7 522 aa14.43□□□□□ -0.1
HDAC1-206ENST00000476391 PAPPAQ13219 1627 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 EIF3FO00303 357 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 XPOTO43592 962 aaKnown RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ESRRBO95718 433 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 EPHB1P54762 984 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 RPS3AP61247 264 aaKnown RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 PSMD6Q15008 389 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 NDUFA5Q16718 116 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CBWD6Q4V339 395 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CBWD3Q5JTY5 395 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CBWD5Q5RIA9 395 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CAPN12Q6ZSI9 719 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 GSTA5Q7RTV2 222 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 AMIGO2Q86SJ2 522 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ADCY4Q8NFM4 1077 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 PAFAH2Q99487 392 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ANO3Q9BYT9 981 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 UNKQ9C0B0 810 aaKnown RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 TRNAU1APQ9NX07 287 aaKnown RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ASTN2O75129 1339 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 POTEB3A0JP26 581 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 MEI4A8MW99 385 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 GOLGA8RI6L899 631 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 K7EPI3 171 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CLIC2O15247 247 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 MARCH6O60337 910 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CIITAP33076 1130 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ALDH18A1P54886 795 aaKnown RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 EFTUD2Q15029 972 aaKnown RBP eCLIP14.42□□□□□ -0.12e-10■■□□□ 13.8
HDAC1-206ENST00000476391 SMUG1Q53HV7 270 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 METTL21CQ5VZV1 264 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ATG16L1Q676U5 607 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ZNF746Q6NUN9 644 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 POTEBQ6S5H4 581 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 TPTE2Q6XPS3 522 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 SAPCD2Q86UD0 394 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 TICAM1Q8IUC6 712 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ANKRD36BP1Q96IX9 119 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 PLEKHA8Q96JA3 519 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 FAM111AQ96PZ2 611 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 SLC2A11Q9BYW1 496 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 INO80BQ9C086 356 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 PAIP1Q9H074 479 aaKnown RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ACP6Q9NPH0 428 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 CDH7Q9ULB5 785 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ZNF330Q9Y3S2 320 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-206ENST00000476391 SPO11Q9Y5K1 396 aa14.42□□□□□ -0.1
HDAC1-206ENST00000476391 ZNF804BA4D1E1 1349 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 PTPN2P17706 415 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 ACAT1P24752 427 aaKnown RBP14.41□□□□□ -0.1
HDAC1-206ENST00000476391 C21orf59P57076 290 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 TUBA4AP68366 448 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 MYL7Q01449 175 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 CYP4A11Q02928 519 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 SLC18A2Q05940 514 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 ISLR2Q6UXK2 745 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 ARID3BQ8IVW6 561 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-206ENST00000476391 USP6NLQ92738 828 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 PCDHB18PQ96TA0 734 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 CCDC68Q9H2F9 335 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 ACSS3Q9H6R3 686 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 PARVBQ9HBI1 364 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 TRMT112Q9UI30 125 aaKnown RBP14.41□□□□□ -0.1
HDAC1-206ENST00000476391 ITGA11Q9UKX5 1188 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms