RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 BEGAINQ9BUH8 593 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TRIM55Q9BYV6 548 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 KCNMB3Q9NPA1 279 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 E9PBE3 544 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 M0R2N6 131 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TNPO2O14787 897 aaKnown RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 KLHL41O60662 606 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 CDH16O75309 829 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 SUPT3HO75486 399 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 KRT36O76013 467 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TJP3O95049 919 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 CST3P01034 146 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 RARBP10826 455 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 CETPP11597 493 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 DESP17661 470 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TSPAN8P19075 237 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 ACAT1P24752 427 aaKnown RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 RPS12P25398 132 aaKnown RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 BCAR1P56945 870 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 PRAMEP78395 509 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 OLIG2Q13516 323 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 CUL3Q13618 768 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 EMC2Q15006 297 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 ZCWPW2Q504Y3 356 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TRMT10CQ7L0Y3 403 aaKnown RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 ACOT1Q86TX2 421 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 ALYREFQ86V81 257 aaKnown RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 NUDCD3Q8IVD9 361 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 SCUBE3Q8IX30 993 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 ELOA2Q8IYF1 753 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 UNC5BQ8IZJ1 945 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 NDUFAF2Q8N183 169 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 SCFD2Q8WU76 684 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 PYDC1Q8WXC3 89 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 MKL1Q969V6 931 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TMA16Q96EY4 203 aaKnown RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 FAM163AQ96GL9 167 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-204ENST00000476379 PHF12Q96QT6 1004 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TSSK1BQ9BXA7 367 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 MAGEB5Q9BZ81 275 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 TRIM4Q9C037 500 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 WNT8AQ9H1J5 351 aa5.22□□□□□ -1.57
CCDC39-204ENST00000476379 A6NJR5 290 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 SPDYE16A6NNV3 312 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 C9JVG2 144 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 PJA2O43164 708 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 HCRTO43612 131 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 LYPLA1O75608 230 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 SMNDC1O75940 238 aaKnown RBP eCLIP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 AGTP01019 485 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ZNF286BP0CG31 522 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ENO3P13929 434 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 CHRNB2P17787 502 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 DSG3P32926 999 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ATXN1P54253 815 aaKnown RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ACTR2P61160 394 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 MPP2Q14168 576 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ACAP1Q15027 740 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 CNGA2Q16280 664 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ASTE1Q2TB18 679 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 SPOCD1Q6ZMY3 1216 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 DENND5BQ6ZUT9 1274 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 CTU1Q7Z7A3 348 aaKnown RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ZBTB8OSQ8IWT0 167 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ZDHHC14Q8IZN3 488 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 LRRC57Q8N9N7 239 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 SPDYE1Q8NFV5 336 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 SYTL5Q8TDW5 730 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 PRPF31Q8WWY3 499 aaKnown RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 L3MBTL3Q96JM7 780 aaPredicted RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 TSNARE1Q96NA8 513 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 TSC22D3Q99576 134 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 TRAIPQ9BWF2 469 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 B3GNT5Q9BYG0 378 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 UBXN6Q9BZV1 441 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 MRPL47Q9HD33 250 aaKnown RBP5.21□□□□□ -1.57
CCDC39-204ENST00000476379 SIX2Q9NPC8 291 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 GABRQQ9UN88 632 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 PLA2G4CQ9UP65 541 aa5.21□□□□□ -1.57
CCDC39-204ENST00000476379 ESYT2A0FGR8 921 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TTLL13PA6NNM8 815 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ZBBXA8MT70 800 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 DDX3YO15523 660 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TTC4O95801 387 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PSAPP07602 524 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PHBP35232 272 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RFC1P35251 1148 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ELK3P41970 407 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PLK1P53350 603 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TMED1Q13445 227 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 DHX34Q14147 1143 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 KPNB1Q14974 876 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 SLC1A5Q15758 541 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 PCSK7Q16549 785 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RAB6CQ53S08 254 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 ANKRD22Q5VYY1 191 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 RFWD3Q6PCD5 774 aa5.21□□□□□ -1.58
CCDC39-204ENST00000476379 C15orf52Q6ZUT6 534 aaKnown RBP5.21□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM35BQ8NCS4 154 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms