RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 LBHD1Q9BQE6 289 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-217ENST00000475693 KIAA1257Q9ULG3 409 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 SZT2Q5T011 3432 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 E5RJQ4 531 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 MAP3K7CLP57077 242 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 RPL7AP62424 266 aaKnown RBP19.1■□□□□ 0.65
ATG4B-217ENST00000475693 ARHGAP17Q68EM7 881 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 TPCN2Q8NHX9 752 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 CLEC4CQ8WTT0 213 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 SLC35F5Q8WV83 523 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 AUTS2Q8WXX7 1259 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 RFFLQ8WZ73 363 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 NOX5Q96PH1 765 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 TMEM175Q9BSA9 504 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 CDH9Q9ULB4 789 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 INTUQ9ULD6 942 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 CEP83Q9Y592 693 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 SLC4A7Q9Y6M7 1214 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 BUB1BO60566 1050 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-217ENST00000475693 EFCAB14O75071 495 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 LSM8O95777 96 aaKnown RBP19.1■□□□□ 0.65
ATG4B-217ENST00000475693 ATP1A1P05023 1023 aaKnown RBP19.1■□□□□ 0.65
ATG4B-217ENST00000475693 CYP1A2P05177 515 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 BDNFP23560 247 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 TAF5Q15542 800 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 SLC39A12Q504Y0 691 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 INTS6LQ5JSJ4 861 aaKnown RBP19.1■□□□□ 0.65
ATG4B-217ENST00000475693 SCUBE3Q8IX30 993 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 ANKRD52Q8NB46 1076 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 MYCBPAPQ8TBZ2 947 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 PKMYT1Q99640 499 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 ACBD6Q9BR61 282 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 MIS12Q9H081 205 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 KRT82Q9NSB4 513 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 HESX1Q9UBX0 185 aa19.1■□□□□ 0.65
ATG4B-217ENST00000475693 ADAM12O43184 909 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 TRAPPC3O43617 180 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 GRAP2O75791 330 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 ARHGEF15O94989 841 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 TYMPP19971 482 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 MAMLD1Q13495 774 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 TMCO3Q6UWJ1 677 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 MNS1Q8NEH6 495 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 HNRNPABQ99729 332 aaKnown RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 FAM124BQ9H5Z6 455 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 SYNCQ9H7C4 482 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 DSEQ9UL01 958 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 NCANO14594 1321 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 SF3B1O75533 1304 aaKnown RBP eCLIP19.09■□□□□ 0.657e-7■■■■□ 20.8
ATG4B-217ENST00000475693 OAZ2O95190 189 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 LCP1P13796 627 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 ATP2A2P16615 1042 aaKnown RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 FGFR3P22607 806 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 PCSK1P29120 753 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 MAGEA10P43363 369 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 NDUFV1P49821 464 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 MESDQ14696 234 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 CTXN3Q4LDR2 81 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 FAM171BQ6P995 826 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 PSRC1Q6PGN9 363 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 CLEC20AQ6ZU45 233 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 HERC6Q8IVU3 1022 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 THEM5Q8N1Q8 247 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 TTC9BQ8N6N2 239 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 COLGALT1Q8NBJ5 622 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 ZNF564Q8TBZ8 553 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-217ENST00000475693 HERVK_113Q902F9 699 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 SMOQ99835 787 aa19.09■□□□□ 0.65
ATG4B-217ENST00000475693 SRGAP2O75044 1071 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 LINC00271P0C7V0 271 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 CYP2F1P24903 491 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 DNAJB2P25686 324 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 CASQ1P31415 396 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 RNASE9P60153 205 aaKnown RBP19.08■□□□□ 0.65
ATG4B-217ENST00000475693 GPRIN1Q7Z2K8 1008 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 FAM35AQ86V20 835 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 ZMIZ2Q8NF64 920 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 RNF216Q9NWF9 866 aaPredicted RBP19.08■□□□□ 0.65
ATG4B-217ENST00000475693 MTUS1Q9ULD2 1270 aa19.08■□□□□ 0.65
ATG4B-217ENST00000475693 AP1G2O75843 785 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 SOAT2O75908 522 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
ATG4B-217ENST00000475693 SHHQ15465 462 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 SDHAF4Q5VUM1 108 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 DAAM2Q86T65 1068 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 PIGZQ86VD9 579 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 XYLT1Q86Y38 959 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 CMTR2Q8IYT2 770 aaKnown RBP19.08■□□□□ 0.64
ATG4B-217ENST00000475693 SLC39A11Q8N1S5 342 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 EMC1Q8N766 993 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 LRRC57Q8N9N7 239 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 JOSD2Q8TAC2 188 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 C18orf8Q96DM3 657 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 ZNF558Q96NG5 402 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 DUSP16Q9BY84 665 aa19.08■□□□□ 0.64
ATG4B-217ENST00000475693 BTNL10A8MVZ5 291 aa19.07■□□□□ 0.64
ATG4B-217ENST00000475693 TLL1O43897 1013 aa19.07■□□□□ 0.64
ATG4B-217ENST00000475693 FAM163BP0C2L3 166 aa19.07■□□□□ 0.64
ATG4B-217ENST00000475693 HTRA4P83105 476 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms