RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OVOL3O00110 214 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 ONECUT2O95948 504 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 MYF5P13349 255 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 NDUFB7P17568 137 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 MYO1EQ12965 1108 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 POLD3Q15054 466 aaPredicted RBP7.87□□□□□ -1.15
SMC5-203ENST00000475540 PLA1AQ53H76 456 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 SLC15A3Q8IY34 581 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 FAM98AQ8NCA5 519 aaKnown RBP7.87□□□□□ -1.15
SMC5-203ENST00000475540 APIPQ96GX9 242 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 BHMT2Q9H2M3 363 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 R3HDMLQ9H3Y0 253 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 PRDM13Q9H4Q3 707 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 SERTAD4Q9NUC0 356 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 OGDHLQ9ULD0 1010 aa7.87□□□□□ -1.15
SMC5-203ENST00000475540 TMEM233B4DJY2 109 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 PARNO95453 639 aaKnown RBP7.86□□□□□ -1.15
SMC5-203ENST00000475540 MAP4K4O95819 1239 aaPredicted RBP7.86□□□□□ -1.15
SMC5-203ENST00000475540 FAM163BP0C2L3 166 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 WT1P19544 449 aaPredicted RBP7.86□□□□□ -1.15
SMC5-203ENST00000475540 GPD1P21695 349 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 DGKEP52429 567 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 SP2Q02086 613 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 TREML2Q5T2D2 321 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 DPY19L2P1Q6NXN4 242 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 ATG4AQ8WYN0 398 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 MAML1Q92585 1016 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 NMD3Q96D46 503 aaKnown RBP7.86□□□□□ -1.15
SMC5-203ENST00000475540 BBC3Q96PG8 261 aaPredicted RBP7.86□□□□□ -1.15
SMC5-203ENST00000475540 ZNF287Q9HBT7 754 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 GLOD4Q9HC38 313 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 PTGFRNQ9P2B2 879 aa7.86□□□□□ -1.15
SMC5-203ENST00000475540 AFF4Q9UHB7 1163 aaKnown RBP7.86□□□□□ -1.15
SMC5-203ENST00000475540 EBLN1P0CF75 366 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 RHCEP18577 417 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 PEX2P28328 305 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 CCT8P50990 548 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 PRKAG1P54619 331 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 FMO1Q01740 532 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 RHDQ02161 417 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 DCAF12L1Q5VU92 463 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 MAVSQ7Z434 540 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 RASAL3Q86YV0 1011 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 ZNF384Q8TF68 577 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 PPP2R3CQ969Q6 453 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 STK32BQ9NY57 414 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 CHPF2Q9P2E5 772 aa7.85□□□□□ -1.15
SMC5-203ENST00000475540 A1L4Q6 167 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 TRIM43BA6NCK2 446 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 PYCARD-AS1I3L0S3 204 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 PROP1O75360 226 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 KCNA3P22001 575 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 PDE6CP51160 858 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 PDE1AP54750 535 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 ZIK1Q3SY52 487 aaPredicted RBP7.84□□□□□ -1.15
SMC5-203ENST00000475540 MICU3Q86XE3 530 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 GLG1Q92896 1179 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 SPSB4Q96A44 273 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 TTC17Q96AE7 1141 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 TRIM43Q96BQ3 446 aaPredicted RBP7.84□□□□□ -1.15
SMC5-203ENST00000475540 PPP1R9BQ96SB3 815 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 CXorf36Q9H7Y0 433 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 XPNPEP3Q9NQH7 507 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 TRMT13Q9NUP7 481 aaKnown RBP7.84□□□□□ -1.15
SMC5-203ENST00000475540 SH2B3Q9UQQ2 575 aa7.84□□□□□ -1.15
SMC5-203ENST00000475540 MBD3L4A6NDZ8 208 aaPredicted RBP7.83□□□□□ -1.16
SMC5-203ENST00000475540 MBD3L3A6NE82 208 aaPredicted RBP7.83□□□□□ -1.16
SMC5-203ENST00000475540 RASSF9O75901 435 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 IL6RP08887 468 aaPredicted RBP7.83□□□□□ -1.16
SMC5-203ENST00000475540 LIPAP38571 399 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 INSCQ1MX18 579 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 C3orf38Q5JPI3 329 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 DEPDC1Q5TB30 811 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 WDR53Q7Z5U6 358 aaPredicted RBP7.83□□□□□ -1.16
SMC5-203ENST00000475540 DGKHQ86XP1 1220 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 BPIFB1Q8TDL5 484 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 OSCP1Q8WVF1 389 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 ARPP21Q9UBL0 812 aaPredicted RBP7.83□□□□□ -1.16
SMC5-203ENST00000475540 KAT6AQ92794 2004 aa7.83□□□□□ -1.16
SMC5-203ENST00000475540 C1RP00736 705 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 FESP07332 822 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 CSF1RP07333 972 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 CD38P28907 300 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 CLCN2P51788 898 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 ATXN1P54253 815 aaKnown RBP7.82□□□□□ -1.16
SMC5-203ENST00000475540 SEMA5AQ13591 1074 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 ANKRD16Q6P6B7 361 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 SPARTQ8N0X7 666 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 OR56A3Q8NH54 315 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 STK31Q9BXU1 1019 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 CCNL1Q9UK58 526 aaPredicted RBP7.82□□□□□ -1.16
SMC5-203ENST00000475540 WNT6Q9Y6F9 365 aa7.82□□□□□ -1.16
SMC5-203ENST00000475540 LRRC3CA6NJW4 275 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 QSOX1O00391 747 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 C1QL1O75973 258 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 JUPP14923 745 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 RPL17P18621 184 aaKnown RBP7.81□□□□□ -1.16
SMC5-203ENST00000475540 KLRC1P26715 233 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 ITPKBP27987 946 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 ADORA2AP29274 412 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms