RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 NRDE2Q9H7Z3 1164 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 CRTAC1Q9NQ79 661 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 CYLDQ9NQC7 956 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 METTL5Q9NRN9 209 aaKnown RBP14.49□□□□□ -0.09
TRAF4-210ENST00000475329 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 DNAJB4Q9UDY4 337 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 KIAA1671Q9BY89 1806 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 COL4A6Q14031 1691 aa14.49□□□□□ -0.09
TRAF4-210ENST00000475329 TBKBP1A7MCY6 615 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 E5RJQ4 531 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 F8W810 466 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 PDE2AO00408 941 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 XPO1O14980 1071 aaKnown RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 TRAPPC3O43617 180 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 CEP104O60308 925 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 KRT3P12035 628 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 ACADSBP45954 432 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 RGS19P49795 217 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 RGS7P49802 495 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 RPL7AP62424 266 aaKnown RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 PLCB3Q01970 1234 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 ITIH3Q06033 890 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 FAM102AQ5T9C2 384 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 OVOS1Q6IE37 1185 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 OR6B2Q6IFH4 312 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 PMF1Q6P1K2 205 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 FAM183BPQ6ZVS7 135 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 RSRC2Q7L4I2 434 aaKnown RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 MS4A14Q96JA4 679 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 ACBD6Q9BR61 282 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 TMEM175Q9BSA9 504 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 COLEC11Q9BWP8 271 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 PRG3Q9Y2Y8 225 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 V9GYY5 206 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-210ENST00000475329 MYO16Q9Y6X6 1858 aa14.48□□□□□ -0.09
TRAF4-210ENST00000475329 ABHD14A-ACY1A0A1B0GW23 586 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 PGRMC1O00264 195 aaKnown RBP14.47□□□□□ -0.09
TRAF4-210ENST00000475329 TULP2O00295 520 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 EFCAB14O75071 495 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 FAM200BP0CF97 657 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 RAG1P15918 1043 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 NPR3P17342 541 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 PLA2G4AP47712 749 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 TSPY1Q01534 308 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 YWHAHQ04917 246 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-210ENST00000475329 PIGHQ14442 188 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-210ENST00000475329 CLUL1Q15846 466 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 INTS6LQ5JSJ4 861 aaKnown RBP14.47□□□□□ -0.09
TRAF4-210ENST00000475329 KIAA0319Q5VV43 1072 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
TRAF4-210ENST00000475329 TMEM110Q86TL2 294 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 FAM35AQ86V20 835 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 CPNE8Q86YQ8 564 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 ZDHHC17Q8IUH5 632 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 RASGEF1CQ8N431 466 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 TMEM199Q8N511 208 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 NIPA2Q8N8Q9 360 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 MYCBPAPQ8TBZ2 947 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 ACTRT1Q8TDG2 376 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 FNIP1Q8TF40 1166 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 KRT35Q92764 455 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 HSFY1Q96LI6 401 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 RTP3Q9BQQ7 232 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 DUSP16Q9BY84 665 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 B3GNT5Q9BYG0 378 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 KRT82Q9NSB4 513 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 EHD2Q9NZN4 543 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
TRAF4-210ENST00000475329 PCDHA3Q9Y5H8 950 aa14.47□□□□□ -0.09
TRAF4-210ENST00000475329 MYBPHLA2RUH7 354 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 TRIM43BA6NCK2 446 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 PIK3R2O00459 728 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 CLDN5O00501 218 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 NRP1O14786 923 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 SYN3O14994 580 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 PSTPIP1O43586 416 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 TADA2AO75478 443 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 PSMA2P25787 234 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 MARCKSL1P49006 195 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 RPL34P49207 117 aaKnown RBP14.46□□□□□ -0.09
TRAF4-210ENST00000475329 RWDD2BP57060 319 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 OGDHQ02218 1023 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 C2orf54Q08AI8 447 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 ZNF252P-AS1Q0IIN9 211 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 MAPRE1Q15691 268 aaKnown RBP14.46□□□□□ -0.09
TRAF4-210ENST00000475329 ELF2Q15723 593 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 CCDC142Q17RM4 750 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 ERCC6LQ2NKX8 1250 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 SEL1L2Q5TEA6 688 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 DCAF12L1Q5VU92 463 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 PAQR9Q6ZVX9 377 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 JOSD2Q8TAC2 188 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 ALG3Q92685 438 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 MYLPFQ96A32 169 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 TRIM43Q96BQ3 446 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-210ENST00000475329 VWCEQ96DN2 955 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 PCED1BQ96HM7 432 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.094e-8■■□□□ 13.6
TRAF4-210ENST00000475329 SMARCAL1Q9NZC9 954 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms