RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 SMPD1P17405 629 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 STX2P32856 288 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.31
RNF220-211ENST00000474956 SLC1A1P43005 524 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 MSH2P43246 934 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 CAV1Q03135 178 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 ENPEPQ07075 957 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 SNAPC2Q13487 334 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 ASRGL1Q7L266 308 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.31
RNF220-211ENST00000474956 FITM2Q8N6M3 262 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 MAIP1Q8WWC4 291 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 TGS1Q96RS0 853 aaKnown RBP13.08□□□□□ -0.31
RNF220-211ENST00000474956 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 KATNBL1Q9H079 304 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 MROH8Q9H579 483 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 SETD4Q9NVD3 440 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 KLHL14Q9P2G3 628 aa13.08□□□□□ -0.31
RNF220-211ENST00000474956 TRIP12Q14669 1992 aaPredicted RBP13.08□□□□□ -0.32
RNF220-211ENST00000474956 GOLGA8MH3BSY2 632 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 TNNC2P02585 160 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 HIC1Q14526 733 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 PPP1R15BQ5SWA1 713 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 ILDR2Q71H61 639 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 GPRC5AQ8NFJ5 357 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 GRAMD1AQ96CP6 724 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 FAXDC2Q96IV6 333 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 MAGEB18Q96M61 343 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.32
RNF220-211ENST00000474956 METTL5Q9NRN9 209 aaKnown RBP13.08□□□□□ -0.32
RNF220-211ENST00000474956 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
RNF220-211ENST00000474956 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 CCL15-CCL14A0A0B4J2E2 113 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 ATP11AP98196 1134 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 CCL15Q16663 113 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 P3H1Q32P28 736 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 TRNP1Q6NT89 227 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 TRIM72Q6ZMU5 477 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 GDAP1Q8TB36 358 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 PTPN18Q99952 460 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF220-211ENST00000474956 NME7Q9Y5B8 376 aa13.08□□□□□ -0.32
RNF220-211ENST00000474956 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 B4GALT4O60513 344 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 GAS8O95995 478 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 PAX7P23759 505 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 ABCD1P33897 745 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 GDF10P55107 478 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 GRK7Q8WTQ7 553 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 MRRFQ96E11 262 aaKnown RBP13.07□□□□□ -0.32
RNF220-211ENST00000474956 C2orf40Q9H1Z8 148 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 NKIRAS1Q9NYS0 192 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 STK38LQ9Y2H1 464 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 CITO14578 2027 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 H3BRB1 525 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 DIAPH2O60879 1101 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 ATF2P15336 505 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 RGS7P49802 495 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 PSMC1P62191 440 aaKnown RBP13.07□□□□□ -0.32
RNF220-211ENST00000474956 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 PTK6Q13882 451 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 ZKSCAN8Q15776 578 aaPredicted RBP13.07□□□□□ -0.32
RNF220-211ENST00000474956 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 KIRREL3Q8IZU9 778 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 PRCCQ92733 491 aaPredicted RBP13.07□□□□□ -0.32
RNF220-211ENST00000474956 FAM81BQ96LP2 452 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 TUT1Q9H6E5 874 aaKnown RBP13.07□□□□□ -0.32
RNF220-211ENST00000474956 LGALS13Q9UHV8 139 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
RNF220-211ENST00000474956 CDH16O75309 829 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 LRCH4O75427 683 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 GH1P01241 217 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 CCNB1P14635 433 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 MPP2Q14168 576 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 TFDP1Q14186 410 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 MTHFD1LQ6UB35 978 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
RNF220-211ENST00000474956 NPLOC4Q8TAT6 608 aa13.06□□□□□ -0.32
RNF220-211ENST00000474956 ZMAT2Q96NC0 199 aaKnown RBP13.06□□□□□ -0.32
RNF220-211ENST00000474956 TRAIPQ9BWF2 469 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms