RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ARL14EPQ8N8R7 260 aaPredicted RBP15.02■□□□□ -0
CCDC78-209ENST00000474647 C1orf127Q8N9H9 656 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 FSIP1Q8NA03 581 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 TSTD1Q8NFU3 115 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 CACTINQ8WUQ7 758 aaKnown RBP15.02■□□□□ -0
CCDC78-209ENST00000474647 EZH1Q92800 747 aaPredicted RBP15.02■□□□□ -0
CCDC78-209ENST00000474647 TRMT2BQ96GJ1 504 aaKnown RBP15.02■□□□□ -0
CCDC78-209ENST00000474647 EPSTI1Q96J88 318 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 LSM14BQ9BX40 385 aaKnown RBP15.02■□□□□ -0
CCDC78-209ENST00000474647 TPSD1Q9BZJ3 242 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 TMEM206Q9H813 350 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 ABCB6Q9NP58 842 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 EXOC7Q9UPT5 735 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 SNX9Q9Y5X1 595 aa15.02■□□□□ -0
CCDC78-209ENST00000474647 GOLGA8IPA6NC78 632 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 C2orf78A6NCI8 922 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 GOLGA8JA6NMD2 632 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 PPP1R37O75864 691 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 CAVIN2O95810 425 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 NOVA1P51513 510 aaKnown RBP15.01□□□□□ -0.01
CCDC78-209ENST00000474647 SHC2P98077 582 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 NR1H3Q13133 447 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 LARP1BQ659C4 914 aaKnown RBP15.01□□□□□ -0.01
CCDC78-209ENST00000474647 TTC30AQ86WT1 665 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 SYCP3Q8IZU3 236 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 SH3RF2Q8TEC5 729 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 ACCSQ96QU6 501 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
CCDC78-209ENST00000474647 ITGA11Q9UKX5 1188 aa15.01□□□□□ -0.01
CCDC78-209ENST00000474647 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
CCDC78-209ENST00000474647 SPEGQ15772 3267 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 C4orf47A7E2U8 309 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 CD2BP2O95400 341 aaKnown RBP15□□□□□ -0.01
CCDC78-209ENST00000474647 LDHAP00338 332 aaKnown RBP15□□□□□ -0.01
CCDC78-209ENST00000474647 TMEM191BP0C7N4 346 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 PSMC1P62191 440 aaKnown RBP15□□□□□ -0.01
CCDC78-209ENST00000474647 C2orf27AQ580R0 203 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 L1TD1Q5T7N2 865 aaKnown RBP15□□□□□ -0.01
CCDC78-209ENST00000474647 LMBRD2Q68DH5 695 aaPredicted RBP15□□□□□ -0.01
CCDC78-209ENST00000474647 SCARA3Q6AZY7 606 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 ANO7Q6IWH7 933 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 USP49Q70CQ1 688 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 BRAPQ7Z569 592 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 LRRC52Q8N7C0 313 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 MYRFLQ96LU7 910 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 PKMYT1Q99640 499 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 MTMR12Q9C0I1 747 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 SEL1LQ9UBV2 794 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 STK17AQ9UEE5 414 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 CCDC39Q9UFE4 941 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 EBF1Q9UH73 591 aa15□□□□□ -0.01
CCDC78-209ENST00000474647 RALYQ9UKM9 306 aaKnown RBP15□□□□□ -0.01
CCDC78-209ENST00000474647 LNP1A1A4G5 178 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 BCLAF3A2AJT9 711 aaKnown RBP14.99□□□□□ -0.01
CCDC78-209ENST00000474647 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
CCDC78-209ENST00000474647 NFATC1O95644 943 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 IDEP14735 1019 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 GAP43P17677 238 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 HDCP19113 662 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 PCSK1P29120 753 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 LHX1P48742 406 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 CASP5P51878 434 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 ZNF252P-AS1Q0IIN9 211 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 FOXC1Q12948 553 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 CFAP221Q4G0U5 840 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 USP39Q53GS9 565 aaKnown RBP14.99□□□□□ -0.01
CCDC78-209ENST00000474647 DAB2IPQ5VWQ8 1189 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 TOP6BLQ8N6T0 577 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 MYLPFQ96A32 169 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 PCIF1Q9H4Z3 704 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 PDE11AQ9HCR9 933 aa14.99□□□□□ -0.01
CCDC78-209ENST00000474647 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
CCDC78-209ENST00000474647 GON4LQ3T8J9 2241 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 MYMKA6NI61 221 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 GIPC1O14908 333 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 ATP2C2O75185 946 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 ANXA13P27216 316 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 GRIK1P39086 918 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 TXLNAP40222 546 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 DHPSP49366 369 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-209ENST00000474647 RBP5P82980 135 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 CYP27A1Q02318 531 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 MYO1EQ12965 1108 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 RRAGBQ5VZM2 374 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 PMS2CLQ68D20 193 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 C4orf50Q6ZRC1 276 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 SV2BQ7L1I2 683 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 CYP2U1Q7Z449 544 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 CCDC33Q8N5R6 958 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 CCDC26Q8TAB7 109 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 FUBP3Q96I24 572 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC78-209ENST00000474647 ANKRD36BP1Q96IX9 119 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 SYT15Q9BQS2 421 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 CBWD1Q9BRT8 395 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 STRA6Q9BX79 667 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 LINC00597Q9H2U6 94 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 GDAP2Q9NXN4 497 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 GCNT4Q9P109 453 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 MAGEC2Q9UBF1 373 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-209ENST00000474647 SIX4Q9UIU6 781 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms