RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CTGFP29279 349 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 LRPAP1P30533 357 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 CHKAP35790 457 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 MDH1P40925 334 aaKnown RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 PNPLA4P41247 253 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 SSR1P43307 286 aaKnown RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 ARSEP51690 589 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 ZNF143P52747 638 aaPredicted RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 ITGA8P53708 1063 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 HNRNPH2P55795 449 aaKnown RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 GJA9P57773 515 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 PPP2R2AP63151 447 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 GNGT1P63211 74 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 BYSLQ13895 437 aaKnown RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 SLC29A2Q14542 456 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 LLGL1Q15334 1064 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 CCDC142Q17RM4 750 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 GOLGA7BQ2TAP0 167 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 UBAP2Q5T6F2 1119 aaKnown RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 PPP1R26Q5T8A7 1209 aaPredicted RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 TAF2Q6P1X5 1199 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 OLFML1Q6UWY5 402 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 CEP128Q6ZU80 1094 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 FAM183BPQ6ZVS7 135 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 TMEM110Q86TL2 294 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 TTC30AQ86WT1 665 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 VSIG1Q86XK7 387 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 CRYBG2Q8N1P7 616 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 EMC1Q8N766 993 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 SLC35F5Q8WV83 523 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 KBTBD7Q8WVZ9 684 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 C18orf25Q96B23 403 aaPredicted RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 CCDC114Q96M63 670 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 HEXIM2Q96MH2 286 aaKnown RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 ZNF560Q96MR9 790 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 CNPY3Q9BT09 278 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 ROPN1BQ9BZX4 212 aaPredicted RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 PHACTR1Q9C0D0 580 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 ROPN1Q9HAT0 212 aaPredicted RBP10.32□□□□□ -0.76
USP39-214ENST00000474572 PCDH9Q9HC56 1237 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 KLHL11Q9NVR0 708 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 ASNSD1Q9NWL6 643 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 DNPEPQ9ULA0 475 aa10.32□□□□□ -0.76
USP39-214ENST00000474572 TSC2P49815 1807 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 LRRD1A4D1F6 860 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 E5RJQ4 531 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 CAND2O75155 1236 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 TCEA3O75764 348 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 RNF8O76064 485 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 AGTP01019 485 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 MIPP30301 263 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 TM4SF4P48230 202 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 ZNF200P98182 395 aaPredicted RBP10.31□□□□□ -0.76
USP39-214ENST00000474572 BEX3Q00994 111 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 FSCN1Q16658 493 aaKnown RBP10.31□□□□□ -0.76
USP39-214ENST00000474572 SOWAHAQ2M3V2 549 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 FBXO47Q5MNV8 452 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 FAM102AQ5T9C2 384 aaPredicted RBP10.31□□□□□ -0.76
USP39-214ENST00000474572 IZUMO3Q5VZ72 239 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 ZNF365Q70YC5 407 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 DPH6Q7L8W6 267 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 ARCQ7LC44 396 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 RPAINQ86UA6 219 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 FAM228AQ86W67 206 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 ZDHHC17Q8IUH5 632 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
USP39-214ENST00000474572 TRPV1Q8NER1 839 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 UBA3Q8TBC4 463 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.76
USP39-214ENST00000474572 PEBP4Q96S96 227 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 NCAPGQ9BPX3 1015 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 ANAPC5Q9UJX4 755 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 NOVA2Q9UNW9 492 aaKnown RBP10.31□□□□□ -0.76
USP39-214ENST00000474572 PIN4Q9Y237 131 aaKnown RBP10.31□□□□□ -0.76
USP39-214ENST00000474572 HES2Q9Y543 173 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 SNX9Q9Y5X1 595 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 TLL2Q9Y6L7 1015 aa10.31□□□□□ -0.76
USP39-214ENST00000474572 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 MYADML2A6NDP7 307 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 ZNF487B1APH4 448 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 TNPO2O14787 897 aaKnown RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 GABBR2O75899 941 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 TTC4O95801 387 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 ABHD2P08910 425 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 FGFR1P11362 822 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 AKAP5P24588 427 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 LSP1P33241 339 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 TAF6P49848 677 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 SLC6A3Q01959 620 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms