RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PBKQ96KB5 322 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 BRIP1Q9BX63 1249 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 EIF2AQ9BY44 585 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 TTYH3Q9C0H2 523 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 MS4A7Q9GZW8 240 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 R3HDMLQ9H3Y0 253 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 FAM83DQ9H4H8 585 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 PRDM13Q9H4Q3 707 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SMURF2Q9HAU4 748 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 KLC4Q9NSK0 619 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SACM1LQ9NTJ5 587 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 TRMT13Q9NUP7 481 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SPATA31A6Q5VVP1 1343 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 COL4A3Q01955 1670 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 LOC102723971A0A1B0GUV8 181 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 AQP7P3A6NL99 342 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 RHPN2P1A8MT19 583 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 PYCARD-AS1I3L0S3 204 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC16A3O15427 465 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 PQBP1O60828 265 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 IL18RAPO95256 599 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 PPP3CBP16298 524 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 ZKSCAN1P17029 563 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 TYRP1P17643 537 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 GATA3P23771 443 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 CLK3P49761 638 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 TOB1P50616 345 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 PDE6CP51160 858 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 SOX10P56693 466 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 HDAC1Q13547 482 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 BMPR2Q13873 1038 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 GALEQ14376 348 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 COBLL1Q53SF7 1204 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 MZT2AQ6P582 158 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 DPP9Q86TI2 863 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 DTX2Q86UW9 622 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC15A3Q8IY34 581 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC44A3Q8N4M1 653 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 NSUN7Q8NE18 718 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 TOR1AIP2Q8NFQ8 470 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 CAGE1Q8TC20 777 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 ACTRT2Q8TDY3 377 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 FKBP10Q96AY3 582 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 FBXL20Q96IG2 436 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 LRIG1Q96JA1 1093 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 COLEC11Q9BWP8 271 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 ACTRT3Q9BYD9 372 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF700Q9H0M5 742 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 ARNT2Q9HBZ2 717 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 EHD3Q9NZN3 535 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 SNX13Q9Y5W8 968 aa4.01□□□□□ -1.77
ECHDC1-213ENST00000474240 DCLK1O15075 740 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 THAP12O43422 761 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 RASSF9O75901 435 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 URI1O94763 535 aaPredicted RBP4□□□□□ -1.77
ECHDC1-213ENST00000474240 CHRM3P20309 590 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 LILRA4P59901 499 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 DAG1Q14118 895 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 CERCAMQ5T4B2 595 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 ARHGAP40Q5TG30 622 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 KAZNQ674X7 775 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 MTHFD1LQ6UB35 978 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 KSR2Q6VAB6 950 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 NOL8Q76FK4 1167 aaKnown RBP4□□□□□ -1.77
ECHDC1-213ENST00000474240 MICU3Q86XE3 530 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 SPARTQ8N0X7 666 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC30A5Q8TAD4 765 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 MYCBPAPQ8TBZ2 947 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 NELL1Q92832 810 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 AMBRA1Q9C0C7 1298 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 SMOC2Q9H3U7 446 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 VSX1Q9NZR4 365 aaPredicted RBP4□□□□□ -1.77
ECHDC1-213ENST00000474240 CPNE7Q9UBL6 633 aa4□□□□□ -1.77
ECHDC1-213ENST00000474240 EPN1Q9Y6I3 576 aaPredicted RBP4□□□□□ -1.77
ECHDC1-213ENST00000474240 USP19O94966 1318 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 ANXA2P07355 339 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 TXNP10599 105 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 CXCR5P32302 372 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 MPLP40238 635 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 GRIA3P42263 894 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 DGKEP52429 567 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF134P52741 427 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 PRKAG1P54619 331 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 BTKQ06187 659 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 ARHGEF7Q14155 803 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC29A2Q14542 456 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF169Q14929 603 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 PLA1AQ53H76 456 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 TMEM63BQ5T3F8 832 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 DCAF12L1Q5VU92 463 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 RGS7BPQ6MZT1 257 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 USP17L6PQ6QN14 398 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 BEND5Q7L4P6 421 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF804AQ7Z570 1209 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 WDR53Q7Z5U6 358 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 RAB11FIP4Q86YS3 637 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 LPIN2Q92539 896 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 MAML1Q92585 1016 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms